Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1169 ATGGGGAATAAGATAATAGCGCCATTTGTGGGAATGGTAATGGCTATGGTGTTGCAAAGTGGTAGCATGGTTGTTATCAAAGCAGCCATGAATGATGACTTCAACAAATATGTCTTGATTGTCTATTCTTTGGCACTCTCCACCCTACTTCTTCTCCCCTTTCTCTTCCTTCTACCCAGGTCAGAGCGTCCTACTCTGAGTTTCTCAACACTTTGCAACCTATTTTTGCTTTCTCTGTGTGGAAGTTCAGGACAAATATTTGCATATGTGGGCATAGATCTCAGCTCACCAACTCTTGCCTCTGCCATGCTCAACCTCATTCCAGCTTTAACTTTTGTACTTGCACTTTTATTCAGGATGGAAAAAGTTGAATGGGGACATTTCAGCATCCAAGCTAAAGTCTTGGGAACAGTGGTATCAATTGGTGGAGCATTTGTTGTGATATTATATAAGGGCCCACCAATCTTCAAGGCACCCATCTCCTCACTCTCTTCAATCCCATTATCATTTTCACCTCATTTTAACTGGATCTTGGGAGGCTTTTTCTGTGTTGCTGATTCTTTCGTAGCTTCAATCTGGTATATATATCAGGCGTCAGTAATAAGGAATTACCCTGCTGTAATGGTGACAGTGTTCTTCCAACTCTTATTTTCAACCATTCAGTGCTCAATATTTGCATTAATTGCAGTTAGAGATCAAAGTGCATGGCAACTGAAGCTAGACACAGGGTTGATTGCAATCTTTTACCAGGCAATAGCTGCAACAACATTACGGTACCTGTTATGCACTTGGAGCGTCCAAAAAGCTGGACCATTTTTTTGCTCTATGTTCAAACCTATTTTAATCATCTTCACTGTTATCATGGGTGCTCTGTTCCTTGGAGATGACTTTTACCTTGGAAGCTTGATTGGTGCAGTTATAATCGTGGTAGGTTTTTATGGTGTAATGTGGGGAAAGGCCAAAGAAGAGAAATGCATGATAATTGATGAAGAGAGGTTGCAATCAACGTGCCAAAATGCTCCTCTCTTACATGACAAACACCTTACAGTATAA 1053 0.4084 MGNKIIAPFVGMVMAMVLQSGSMVVIKAAMNDDFNKYVLIVYSLALSTLLLLPFLFLLPRSERPTLSFSTLCNLFLLSLCGSSGQIFAYVGIDLSSPTLASAMLNLIPALTFVLALLFRMEKVEWGHFSIQAKVLGTVVSIGGAFVVILYKGPPIFKAPISSLSSIPLSFSPHFNWILGGFFCVADSFVASIWYIYQASVIRNYPAVMVTVFFQLLFSTIQCSIFALIAVRDQSAWQLKLDTGLIAIFYQAIAATTLRYLLCTWSVQKAGPFFCSMFKPILIIFTVIMGALFLGDDFYLGSLIGAVIIVVGFYGVMWGKAKEEKCMIIDEERLQSTCQNAPLLHDKHLTV* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1169 350 Pfam EamA-like transporter family 12 148 IPR000620 GO:0016020|GO:0016021
Ahy5g1169 350 Pfam EamA-like transporter family 179 316 IPR000620 GO:0016020|GO:0016021
Ahy5g1169 350 PANTHER WAT1-RELATED PROTEIN 7 339 IPR030184 GO:0016021|GO:0022857
Ahy5g1169 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Ahy5g1169 350 PANTHER WAT1-RELATED PROTEIN 7 339 - -
Ahy5g1169 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1169 Ahy-Chr5 30563407 30571111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1169 3 343 Nodulin-like Gene Family AT5G40240 38.682 5.54e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1169 - - gmx:100816194 454.136