Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1087 ATGGACAAACTTTCAATTATAATCAAGGGAAAGAACAGAAGAAGAAGAAGAAGAAGAAGAAAAAGTGCATTAAAATTTCTTGTCTTAGGATTTAGAAAACCGTGTGATGAATGTAATCTAATCCATGCTTCATTCTCTAATGTTATGGCTCTGAAGAATGCTGTGCTTCTTCTGAGCCTTCTCTTTGTTTCACATATTTTTTTGATACAAACATGTTATTCCCAAACCAATTTTAATCCTCAGAACATTGAAACTTTCTATCCAATTGAAACAGCAGAAGAACCATCATTACCAACAATAAATCCGGAAGAATCACCGCCATCTCCATCACCATCATCAAACAGTAAAGTAGCAAAGGCTGTAGCTGCAACTGCAGCATGCACACTAGCTGTTTGTGGAATTGTGTTCTTCTTAGGTCTAAGGTGCTTCAGAGCAAAGAAGAGAATTGACATAACCAACACTACTACAACAACCATGGCTTCTTCTGCAACACATAGAGATCATAGGAATGTTGTGGTGCCTCTGCCTCAGCCTCAACCTCAACCTCAGGTGAGTGTGTATGAGAGAATGGAAGGTAACATAAAAGGGCTGATTGTTGATGAGAATGGTTTGGATGTTGTATTTTGGAAAAGGCTTCAAGATGGTAAGAACTCAAAAGAGGTATTGGGTAAAAGTCACAAAAACAAAGAAAACGATCACGAAGGATATTATGATCAAAGGACACAACCTGAATCTAATGTTCAAGAAACTCCTTTGCTAAGAGGGTTATCTTCAAATTCTTCACATTTGAATATATTTCCTGTAGAACCATACACTATTATGAAGATTCCACCACCTCATCCTCCTCCTCCAATTAATGGTTTTGATAAACTTGATTTTGTTAGCCATTCACAACCAAAACCACCCTCCATTTCTTCATCATCAACTCCTACACCACTTTCACCTTCCACTCCAAGAATCCAAGATAGAAAAAGTTCAGCACCTACACTGCCGCCACCTCCACCACCTCCGCCACCAATTCCAAAGAGCCAAGCAGTGCCACCACCATGTCCTCCACCAGTACCAGAAAGAAAGAGCCAAGCACCTCCACCACAACCTCCTCCTCTTCCACCAATTACTGGTAGAAAGAGCCAAGCCCCGCCACCGCCGCCTCCACCGATTCCTTCTAGAAAGGGGCCACCAAAGGGAGGAAATCCAAAGTCATCATCAAAACCAACTCCTACCCCTATTGAAGCACCATCATACTCGAGAAAAGGCAAATCTAAAGATGAAGATATGCAAGAAACCAGCAATCGTCAAGTGAAACTGAAGCCTCTGCATTGGGATAAAGTCAATGCTAATCTTGATCACTCCATGGTTTGGGACAAAATTGACCGTGGCTCCTTCAGGGTCGATGATGATCTTATGGAAGCTCTCTTTGGCTATGTTGTTAACCACAACACCCCAAAAGCGAATGATTCAGGGAGTCCAAGCAAGGGTTCCTCTGCCTCAGCTCCATCAACAAAGGCATCCACCCTTCTTGACCCAAGAAAATCACAGAACACTGCCATTGTGTTGAAATCTCTTGCAATATCAAGAAAAGAAGTCTTTGATGCACTCCTTGATGGTCATGGCCTCAACACAGATACCATTGAAAAGCTTTCTAGAGTTGCTCCAACAGAAGAAGAGCAATCTCTAATACTCCAATACAGAGGAGATCCTGAAAACCTTCCTGCAGCGGAGTCCTTCCTGTATCATACTCTCAAAGCCGTTCCTTCGGCGTTTAAGCGCTTGAATGCCATGCTGTTCAGGCTGAACTATGATGCCGAGATTGTCGAAATCAAGGAGTTTCTGCAGACACTTGAGTTGGGATGTAAGGAGCTTAGGAACCAAGGAGTGTTCCTGAAGCTTCTTGAAGCAGTGCTTAAGGCCGGAAATCGCATGAATGCAGGTACTCATAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTTAGGAAACTTTCTGATGTGAAGAGCACCGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAGGAAGTGGTCCGATCTGAAGGCAAACGTGCTGTTCTCAATCGAGACTACAGCGTGAGCCGAAGTAGCAGCAGAAGTAGAAGTAGCAGCAGTATTAGCAGTGGAAACACTGAGAATTCTGTTTCAGATGAACAAAGAAAAAGGGAATACATAATACTAGGATTGCCAATTGTTGGAGGGGTCAGTTCTGAGTTCTCCAATGTAAAGAAAGCAACACTAACAGATTACAAAAGTTTTGTTGGTTCAATCTCAGCACTTTCAGCAAGGATAGCTGAGATTCGAGAACTCGTTTTGAAGTGTGGAGGAAATGATAAAGGAGGGAATTTTGCAAGAGAAATGAACCGTTTTCTATCAGAAGCTGAGGAAGAAGTGAAATTGGTGAGTGAAGAACATGGAAGGGTGATGCAGCTTGTGAAGAAAACAACAGCTTATTATCAAGGAGGAGGGGCATGGAAAGAGAGTGAACAACCGCTTCAACTGTTTGAGATAGTGAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGTGCACAAAGTAG 2604 0.4243 MDKLSIIIKGKNRRRRRRRRKSALKFLVLGFRKPCDECNLIHASFSNVMALKNAVLLLSLLFVSHIFLIQTCYSQTNFNPQNIETFYPIETAEEPSLPTINPEESPPSPSPSSNSKVAKAVAATAACTLAVCGIVFFLGLRCFRAKKRIDITNTTTTTMASSATHRDHRNVVVPLPQPQPQPQVSVYERMEGNIKGLIVDENGLDVVFWKRLQDGKNSKEVLGKSHKNKENDHEGYYDQRTQPESNVQETPLLRGLSSNSSHLNIFPVEPYTIMKIPPPHPPPPINGFDKLDFVSHSQPKPPSISSSSTPTPLSPSTPRIQDRKSSAPTLPPPPPPPPPIPKSQAVPPPCPPPVPERKSQAPPPQPPPLPPITGRKSQAPPPPPPPIPSRKGPPKGGNPKSSSKPTPTPIEAPSYSRKGKSKDEDMQETSNRQVKLKPLHWDKVNANLDHSMVWDKIDRGSFRVDDDLMEALFGYVVNHNTPKANDSGSPSKGSSASAPSTKASTLLDPRKSQNTAIVLKSLAISRKEVFDALLDGHGLNTDTIEKLSRVAPTEEEQSLILQYRGDPENLPAAESFLYHTLKAVPSAFKRLNAMLFRLNYDAEIVEIKEFLQTLELGCKELRNQGVFLKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRDYSVSRSSSRSRSSSSISSGNTENSVSDEQRKREYIILGLPIVGGVSSEFSNVKKATLTDYKSFVGSISALSARIAEIRELVLKCGGNDKGGNFAREMNRFLSEAEEEVKLVSEEHGRVMQLVKKTTAYYQGGGAWKESEQPLQLFEIVKDFLGMVDQACIEIARNMQKRKCTK* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1087 867 MobiDBLite consensus disorder prediction 95 115 - -
Ahy5g1087 867 Coils Coil 788 808 - -
Ahy5g1087 867 MobiDBLite consensus disorder prediction 699 719 - -
Ahy5g1087 867 Pfam Formin Homology 2 Domain 428 849 IPR015425 -
Ahy5g1087 867 PANTHER FORMIN-LIKE PROTEIN 4 55 865 - -
Ahy5g1087 867 MobiDBLite consensus disorder prediction 298 324 - -
Ahy5g1087 867 MobiDBLite consensus disorder prediction 327 393 - -
Ahy5g1087 867 MobiDBLite consensus disorder prediction 416 437 - -
Ahy5g1087 867 Gene3D Formin, FH2 domain 448 867 IPR042201 -
Ahy5g1087 867 ProSiteProfiles Formin homology-2 (FH2) domain profile. 426 867 IPR015425 -
Ahy5g1087 867 MobiDBLite consensus disorder prediction 220 239 - -
Ahy5g1087 867 MobiDBLite consensus disorder prediction 277 437 - -
Ahy5g1087 867 MobiDBLite consensus disorder prediction 220 246 - -
Ahy5g1087 867 MobiDBLite consensus disorder prediction 699 718 - -
Ahy5g1087 867 SMART it6_source 426 864 IPR015425 -
Ahy5g1087 867 PANTHER FORMIN-RELATED 55 865 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ahy5g1087 867 MobiDBLite consensus disorder prediction 480 509 - -
Ahy5g1087 867 SUPERFAMILY Formin homology 2 domain (FH2 domain) 503 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1087 Ahy-Chr5 26916721 26920328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1087 59 864 FH2 protein (formin) Gene Family AT1G70140 43.011 6.37e-179 533