Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1039 ATGGCAGAAAAAAATAGTGACTTGAAGCTTTTGAGTGCGTGGTACAGTCCAATGGCCACAAGGGCCAAGATCGCACTTAACATCAAAGGATTGGAATATGAGAACATTGAAGAGGACTTGAACTCCAAAAGTGATCTTCTTCTTCGTTCCAATCCTGTGCACAAGAAAATCCCAGTTCTAATTCATGGTGACAAACCCATATGTGAATCCTTAATCATACTTCAATATATTGATGAGGTTTGGTCCAATGGTCCTTCTATTCTTCCTCGAGATGCTTATGACAGAGCAATTGCTACGTTCTGGGTTTCCTATATTGATGAAAAGTTATTTGTTTGCACGAAGAGCATTTTAGAAGCTGGTGAAGATGTAGAAAAAAAGAAGCCAGACTTTGAGCAATTGGAGGAAGAAATACTTGTGAGGTTGGAAGAGCCATTCAACAAATACAGTGAAGGAGAGTCGTTCTTTGGAGGGAACAAGATTGGACTCATTGACATTATGTTTGGGAGCTTCTTGCCTGTTCTTGGTCTGATAGAAGAGATTAATGGAAAGAAGGTACTTGTAGATGACAAATTCCCGGGGCTGGTGAATTGGGCTGCCAATTTCACTGCGAATTCGGCTGTGACCGGAACTCTTCCTGAGATTGACAGGCTTATTTTATTTGCCAAGGCTCAACAGCAAAAATGGGCTCTCGCTTATAAAGCTACCTCTGCCAACTAA 717 0.4128 MAEKNSDLKLLSAWYSPMATRAKIALNIKGLEYENIEEDLNSKSDLLLRSNPVHKKIPVLIHGDKPICESLIILQYIDEVWSNGPSILPRDAYDRAIATFWVSYIDEKLFVCTKSILEAGEDVEKKKPDFEQLEEEILVRLEEPFNKYSEGESFFGGNKIGLIDIMFGSFLPVLGLIEEINGKKVLVDDKFPGLVNWAANFTANSAVTGTLPEIDRLILFAKAQQQKWALAYKATSAN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1039 238 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Ahy5g1039 238 CDD GST_N_Tau 8 81 - -
Ahy5g1039 238 SFLD Main.3: Omega- and Tau-like 4 231 IPR045073 -
Ahy5g1039 238 CDD GST_C_Tau 92 223 IPR045074 GO:0004364|GO:0006749
Ahy5g1039 238 SUPERFAMILY GST C-terminal domain-like 79 226 IPR036282 -
Ahy5g1039 238 Gene3D Glutaredoxin 1 87 - -
Ahy5g1039 238 Pfam Glutathione S-transferase, C-terminal domain 96 203 IPR004046 -
Ahy5g1039 238 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 222 IPR045073 -
Ahy5g1039 238 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Ahy5g1039 238 Gene3D - 88 231 - -
Ahy5g1039 238 SFLD Glutathione Transferase (cytosolic) 4 231 IPR040079 -
Ahy5g1039 238 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 230 IPR010987 -
Ahy5g1039 238 PANTHER GLUTATHIONE S-TRANSFERASE U17 7 222 - -
Ahy5g1039 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1039 Ahy-Chr5 24301288 24304566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1039 7 222 Glutathione S-transferase Gene Family AT1G10360 50.691 2.35e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1039 K00799 - gmx:547576 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1598 15 33139982 33142474 Ahy5g1039 5 24301288 24304566 PCT
Ahy3g3502 3 133897853 133899661 Ahy5g1039 5 24301288 24304566 PCT