Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1006 ATGCCTCTGGAATCAAATGTGTGTGGCACTCTACCACTGCAGCTGAATGATGAAAAGGAGAGGGAACTTGATTCTACTGAGGAATCCGCCGAATTAGAGCACCTTGCTAAGCCAATCTTGGAAGATATTGCCAGCCTTGTGCAGAAGGGTAGCCAAGCAGAGGCAGAAATACATAAAGGGCATCAAGACTTGCAAAGCAAGCATGAAGGAAGTGGGAGACTGAGAAGCAGCATTGAGTTTTTTGGCAGTAGAATGGACTTTACAGATAGTGATTCCATTGTATTCAATGAAAATAATTTGATTGCTGAAGATATCTCTAAACTAGAAGATGCGTTTAAGCAGCTACTGTCATTTTTCAGCTCTGATGAAGAGGTTGTCAAGCTTGCAAATGACTCAAGATATGGGCTTGGCTGTACTGTTTTCTCAGGCAATCAGAGCCATGCCAGAGAGATAGCTTCGTAG 462 0.4307 MPLESNVCGTLPLQLNDEKERELDSTEESAELEHLAKPILEDIASLVQKGSQAEAEIHKGHQDLQSKHEGSGRLRSSIEFFGSRMDFTDSDSIVFNENNLIAEDISKLEDAFKQLLSFFSSDEEVVKLANDSRYGLGCTVFSGNQSHAREIAS* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1006 153 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 21 153 IPR016163 GO:0016620
Ahy5g1006 153 Pfam Aldehyde dehydrogenase family 119 152 IPR015590 GO:0016491
Ahy5g1006 153 SUPERFAMILY ALDH-like 118 152 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1006 Ahy-Chr5 20448244 20451907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1006 109 153 Aldehyde Dehydrogenase Gene Family AT3G66658 59.574 4.42e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1006 - K07195 adu:107489169 301.212