Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0964 ATGGCTTTCTTACCAGCAAATTTCATGCTACAAACCCCTCACCACCATGATGATCACCACCACCAACAACATCATCCACCTTCCCTCAATTCAATCCTACCAACATGCTCACCCCATGATTATCATGGAGGGGGAGCAGCAACATTTCTAGGGAAAAGATCCATGTCATTCTCGGGGATTGATCTTGGAGGAGTAGAAGAAGGTAACAACAATGGGGATGAAGAATTATCAGATGATGGATCACAGATAGGGGAGAAGAAGAGGAGGCTGAACATGGAGCAAGTGAAGGCACTTGAGAAGAGCTTTGAGTTAGGGAACAAGCTTGAACCTGAGAGAAAAATGCAGCTTGCAAGGTCCCTTGGCTTGCAACCAAGGCAAATTGCAATCTGGTTTCAGAATCGAAGAGCAAGGTGGAAGACTAAGCAGTTAGAGAGAGACTACGATCAACTCAAGCGTCAATTCGAAGCCGTCAAATCAGACAATGATGCACTTCACGCCCAGAACCAAAAACTTCAAGCTCAGTGGTGCGAGCGATGGGTGCAGATATTGGCACTGAAAAATAGAGAAGCAACAACAGAGTCAATAAACCTGAACAAAGACACAGAAGGATCATGCAGCAACAGAAGCGAGAACAGTTCAGAGATCAAGTTTGATATTTCGACAAGAACACCAACAACAACAACAACAACAACAACCACCATTGTTGATAGTCCTCTATCATCAAAACCATTCTTTCCATCTTCATCATCCTCCACTAGGCCGCCACATCAGCTTTTTCAGGTTTCGAGGCCCGAGATTCATCTTCATCAGTGTCATCAACAGAATAATAATAATAATAATCATGTGGTGGCTAAAGAAGAGAGTTTGAGCAGCATGTTTGTTGCCATGGATGATCAGTCTGGGTTCTGGCCATGGTTGGAGCAGCAACATTTCAATTGA 939 0.4398 MAFLPANFMLQTPHHHDDHHHQQHHPPSLNSILPTCSPHDYHGGGAATFLGKRSMSFSGIDLGGVEEGNNNGDEELSDDGSQIGEKKRRLNMEQVKALEKSFELGNKLEPERKMQLARSLGLQPRQIAIWFQNRRARWKTKQLERDYDQLKRQFEAVKSDNDALHAQNQKLQAQWCERWVQILALKNREATTESINLNKDTEGSCSNRSENSSEIKFDISTRTPTTTTTTTTTIVDSPLSSKPFFPSSSSSTRPPHQLFQVSRPEIHLHQCHQQNNNNNNHVVAKEESLSSMFVAMDDQSGFWPWLEQQHFN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0964 312 Pfam Homeodomain 86 139 IPR001356 GO:0003677
Ahy5g0964 312 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 312 - -
Ahy5g0964 312 SMART HOX_1 84 145 IPR001356 GO:0003677
Ahy5g0964 312 PRINTS Lambda-repressor HTH signature 112 121 IPR000047 GO:0003677
Ahy5g0964 312 PRINTS Lambda-repressor HTH signature 121 137 IPR000047 GO:0003677
Ahy5g0964 312 Pfam Homeobox associated leucine zipper 141 174 IPR003106 GO:0006355|GO:0043565
Ahy5g0964 312 Coils Coil 133 174 - -
Ahy5g0964 312 SUPERFAMILY Homeodomain-like 76 143 IPR009057 -
Ahy5g0964 312 MobiDBLite consensus disorder prediction 61 88 - -
Ahy5g0964 312 ProSiteProfiles 'Homeobox' domain profile. 81 141 IPR001356 GO:0003677
Ahy5g0964 312 MobiDBLite consensus disorder prediction 223 254 - -
Ahy5g0964 312 CDD homeodomain 86 142 IPR001356 GO:0003677
Ahy5g0964 312 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 312 IPR045224 GO:0003700
Ahy5g0964 312 ProSitePatterns 'Homeobox' domain signature. 116 139 IPR017970 GO:0000981|GO:0006355
Ahy5g0964 312 Gene3D - 78 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0964 Ahy-Chr5 16021489 16023708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0964 1 312 Homeobox Transcription Factor Family AT1G69780 57.911 4.90e-111 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy5g0964 Homeodomain 1.00E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0964 K09338 - gmx:100808033 354.369