Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0954 ATGAACGCATTTTCACATGTTCCTCCTGGGTTTCGGTTCCATCCTACGGATGAAGAACTTGTTGATTACTACCTGAGGAAAAAGATAGCTTCGAAAAGGATTGATCTGGATGTGATAAAAGATGTGGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAAATATGCAAAATAGGAAGCGATGATGAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTACCCAACAGGGACTCGCACCAATAGAGCTACAAAGGCAGGATTCTGGAAAGCCACGGGAAGAGACAAAGCCATATACTCAAGCTCAAGCCATTGCCTCGTTGGTATGAGAAAGACTCTTGTGTTCTACAAAGGACGAGCTCCCAATGGCCTCAAATCAAACTGGATCATGCACGAGTATCGTCTTGACTCCAATCAGGAAGATGGCTGGGTTGTGTGCAGAGTCTTCAAGAAGCGGATGCCCACGCTACGCAACGTGGTAGACTATGATGATCAACTTCCCTTCATGCAAGGATCTCCATCCACTCACTATCCCTGCAAGCACGAGCTTCATCAATTCCAATACAACACCAATGATGCTTTTCTCCAACTTCCACACCTTGAGAGCCCTAATCAAGTTTTGAGTTGCGGCAGCCCCGTTATTGCACCCTATGCCTACGCCGAAAACAACAACAACAATAATGGAACTAGTAGTACTAGTGCTTTGCAGTCCTATTCATCTGAACGCATTCAGCAACAACTTCACTTGCTTTACGGTAGCAATATTGAGCAAGCAGTAGTGGTGGACCAAGTCACGGATTGGAGAGTGCTTGACAAATTTGTTGCTTCTCAACTCATGAGTCAAGATCAAGATCAGGCTTCCAAGGAAACCTGCAGCATGGCTGATGAACAACATGTTGCTACTACTGTGCTTCCAAATGGATCCACGAAGCAGGAAATGGCGCCTCAGGACGACTATGTTTCAACGTCTGCCTCCAGTAACTGCGATATTCACCTGTGGAATTGA 1011 0.4481 MNAFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQEICKIGSDDENEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSSSSHCLVGMRKTLVFYKGRAPNGLKSNWIMHEYRLDSNQEDGWVVCRVFKKRMPTLRNVVDYDDQLPFMQGSPSTHYPCKHELHQFQYNTNDAFLQLPHLESPNQVLSCGSPVIAPYAYAENNNNNNGTSSTSALQSYSSERIQQQLHLLYGSNIEQAVVVDQVTDWRVLDKFVASQLMSQDQDQASKETCSMADEQHVATTVLPNGSTKQEMAPQDDYVSTSASSNCDIHLWN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0954 336 MobiDBLite consensus disorder prediction 309 336 - -
Ahy5g0954 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 322 - -
Ahy5g0954 336 Pfam No apical meristem (NAM) protein 8 137 IPR003441 GO:0003677|GO:0006355
Ahy5g0954 336 Gene3D NAC domain 16 156 IPR036093 GO:0003677|GO:0006355
Ahy5g0954 336 SUPERFAMILY NAC domain 5 153 IPR036093 GO:0003677|GO:0006355
Ahy5g0954 336 ProSiteProfiles NAC domain profile. 7 153 IPR003441 GO:0003677|GO:0006355
Ahy5g0954 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0954 Ahy-Chr5 13980710 13983527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0954 1 335 NAC Transcription Factor Family AT1G12260 51.685 6.23e-114 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy5g0954 NAM 1.80E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0954 - - ahf:112800892 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0954 5 13980710 13983527 Ahy11g1392 11 53546892 53552193 PCT
Ahy5g0954 5 13980710 13983527 Ahy1g1365 1 44477831 44483507 PCT
Ahy11g1392 11 53546892 53552193 Ahy5g0954 5 13980710 13983527 PCT
Ahy1g1365 1 44477831 44483507 Ahy5g0954 5 13980710 13983527 PCT