Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0939 ATGGATTTCAATGGGATTTTTGGAGCTGAATTGGAAGACTCGGATGACAACAGCTCCGATGGAGACCGTGGCTGTTATTATGCGAGTGACGAAGAAGGGGACGAGGATGAAGGTGGTGAGCGCTGCGTTGGTGAGGAAGGTGACCCAACAGGATGCAGAGAAGATGAAAATGGTAACTTCTCAGGTGGTGCCAGTCATGCCGGGGATGATGGGAAAAGTCGCCCAGTTGTCGCAGAGGATTTTATGGGCAGAGAGTTTGTCGGGGAGGAGGATGCCTATCTTGCTTACAAGGAGTTTGCTAGAATGAGGGGTTTCGGGGTCCGCAAGGGCGATGTGGGGCGTGTCGACGGGGTTTTGGTCAGGAGAGACTTTTTCTGCCATCGACAGGGCACCAGACATGCTAAGCACTATGATCGTCCTGAGCGAGTTAGGGAGGAGAGGTTGGAGAGTCGAACCGACTGCAAGGCGAAGTTGAAGATTTTCTATGATGTGCAACGCAGTGTGTGGAAGGTCAGGACCATCTTCGATGAGCACAACCACGAGCTTGCTCCGGCCATGTTTTCACACCTCCTACCTAGCCATCGCTCGATGAGTAATGGTGACAAAGCACAAGTTGATAGCATGAAGCAATTTGGTATACCAACTGCGAAGATAATGGCTTACATGGCTGGTCAATCTGGAGGGTATGGAATGCTGCGATTTACAAAGCGTGATTTGTATAATTATATACATGGTCAAAGGCTGGCCCGAATCAGTGATGGCGATGCTGTAGCAACGATCAGTTACTTGGAGGGCAAGGCGAATGCCGACATGACGACTGTAGCACGTTACACGCGAACTGCCGATGATCGGCTGGGGAGCCTTTTCTGGGTCGACGGTGAGATGATGTCTGACTATCAGTTATTTGGTGATGTTATGGCCTTTGATTCGACGTATCGGTCTAATAAGTACAAGAAACCGCTTGTAGTGTTCTCTGGGTCAAATCACCATAAACAGACAACCATTTTTGGATTTGCGCTCCTGGAGGATGAGGAAGTTCGTACTTACCGGTGGCTGCTGTTAAATCTTGTAGATGTAATGGGAGAGAAGACTCCGTGTGTTGTTGTCACGGATGGGGACAAAGCGATGCGCGCAGCCATCGCGGAGGTGTTCCCGGCAGCTAGGCACCGGCTGTGTGGGTGGCACTTGGAGAAAAACTGTGTTCAGCGGGTTAAGGATACGGAGTTCCGAAAGGTTTTTAAGAAGGCTATGTATGCGAACTTCGAGGTGGAGGACTTCGAGGAATATTGGAAGACGGCGGTGGAGTCACTTGGCCTACAAAATAATAGTTGGGTTCAACAAACATACGAGGTTAAAGAAAGTTGGGCAACAGCATATCTCCGGGGCACTTTCTGTGCGGGATACAGAACAACCTCAAGGTGTGAGGGGATTAATGCATACATAAAGGGGTTCCTGAAATCCACTGATAGCATTTTGGAGCTGGTGCACAGCTTAGATCGCGTTGTAAAGGTTTATCGAAACAACGAAGTCACGGCGCAGTTCTATTCTACGTACTACAGCCCCGTGTTAACAACCGGGCTTGACTCTATCGAGCTTTTTGCATCGAAACTGTACACTCGAGCAGTTTTTAGAGAGGTCAAGAAACAAATCAAGGGTGTTGCAACCTTGCTGTTTCGTGGGAGAGACAGCATCAGCACCACGGTTGTCTACAAGTTTTCAAGGATGGGCGCGCCTGGTAGGATTCACAAGGTTTTGTTCGACCCAGATGACAAGAAAATTCAGTGCGACTGTTCGATGTGGAATAGTGAGGGTATTCCATGTAGTCACATATTCTGCGTGATGAAATACGAGGGTTTGGAACAAATACCGGACAGCCTTATTCTGAGAAGATGGTGCAAGGATGCAAAGGATTCCAGACGGATGCCGGTGACAATGAGACCTGGAGATGAAGGTCGCATGCTTAGGTATGCGGCACTTTCTTCGGCCACAAGCTTGGTCGCAAGACTTGGTTCGGATGAGCGTGAAGACTTCGAATTCGCTAAGGAGAGCATCGCGAGTCTAATAGATAAGCTACGTCACAGAGTTTATGAAAGGGCAGGTGGTCAGCCAGGTATGTCGGGGTGGAAAGCGATGAAGGACCCGGTTGTGGCAAGAACAAAAGGTGCCCCTAAGAGGAAGAAGGAGTTCGACCAATGTAGTCAACCCGACGTGCGAGGGAAGAGGCGTTGCTGCACCAAATGTGGCACACCCGGGCATACCAAGAGGACATGCAGCGGGTACTGTGCACGAGGGGTGTCCGGGATTGGTAATGGGGTCTCCCCCACGGATGGCAACGGTTCGCATGACGGCTCTGCAGCCGCTTCAGCGTCTCTTCCGACCGAGCTCGGTCATGCGTATGAGGATCAAACATCGGCTCATGGCGAAGCTGGTCTAAATAACGTGTCTAGCTCAGCGGCAAATACATCCTCCATGGTGAGTCGGAGAGGTAGTCCATGTTGGCGTCCTCCGTTTTGTGGCGGGGGAAGTGGGGGGAACTTCTTCCTTGGGGGCCAACACATCCACCAATTCTATGCATCCCAACCTTGCTCCGGGCACCAAAGCGATCCGCCGCCGCACGAAGGGCACGGGAGTATGTCGACTCCGATGAGGGCTATGAATGAGGACTTGTTTGAACGGTGGCTGCTCCAGGTACGGGGTTCTCCTGAGATGTACTCCAATATTTTGTCTTTGGATGTATTAGCAGCTCGGACCTGTCCACTAAACCATGTGCCTTTTCATGTTGAACAGAATGTGATGGGTCGTCGCTCGTCGAGCAATATGCAGGGGGGATTTCCCACGCGTGGTACTTGA 2850 0.5084 MDFNGIFGAELEDSDDNSSDGDRGCYYASDEEGDEDEGGERCVGEEGDPTGCREDENGNFSGGASHAGDDGKSRPVVAEDFMGREFVGEEDAYLAYKEFARMRGFGVRKGDVGRVDGVLVRRDFFCHRQGTRHAKHYDRPERVREERLESRTDCKAKLKIFYDVQRSVWKVRTIFDEHNHELAPAMFSHLLPSHRSMSNGDKAQVDSMKQFGIPTAKIMAYMAGQSGGYGMLRFTKRDLYNYIHGQRLARISDGDAVATISYLEGKANADMTTVARYTRTADDRLGSLFWVDGEMMSDYQLFGDVMAFDSTYRSNKYKKPLVVFSGSNHHKQTTIFGFALLEDEEVRTYRWLLLNLVDVMGEKTPCVVVTDGDKAMRAAIAEVFPAARHRLCGWHLEKNCVQRVKDTEFRKVFKKAMYANFEVEDFEEYWKTAVESLGLQNNSWVQQTYEVKESWATAYLRGTFCAGYRTTSRCEGINAYIKGFLKSTDSILELVHSLDRVVKVYRNNEVTAQFYSTYYSPVLTTGLDSIELFASKLYTRAVFREVKKQIKGVATLLFRGRDSISTTVVYKFSRMGAPGRIHKVLFDPDDKKIQCDCSMWNSEGIPCSHIFCVMKYEGLEQIPDSLILRRWCKDAKDSRRMPVTMRPGDEGRMLRYAALSSATSLVARLGSDEREDFEFAKESIASLIDKLRHRVYERAGGQPGMSGWKAMKDPVVARTKGAPKRKKEFDQCSQPDVRGKRRCCTKCGTPGHTKRTCSGYCARGVSGIGNGVSPTDGNGSHDGSAAASASLPTELGHAYEDQTSAHGEAGLNNVSSSAANTSSMVSRRGSPCWRPPFCGGGSGGNFFLGGQHIHQFYASQPCSGHQSDPPPHEGHGSMSTPMRAMNEDLFERWLLQVRGSPEMYSNILSLDVLAARTCPLNHVPFHVEQNVMGRRSSSNMQGGFPTRGT* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0939 949 MobiDBLite consensus disorder prediction 1 73 - -
Ahy5g0939 949 SMART 26again6 593 620 IPR006564 GO:0008270
Ahy5g0939 949 Pfam FAR1 DNA-binding domain 96 183 IPR004330 -
Ahy5g0939 949 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Ahy5g0939 949 Pfam MULE transposase domain 305 399 IPR018289 -
Ahy5g0939 949 ProSiteProfiles Zinc finger CCHC-type profile. 744 757 IPR001878 GO:0003676|GO:0008270
Ahy5g0939 949 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 75 693 - -
Ahy5g0939 949 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 693 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0939 Ahy-Chr5 13672148 13675889 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g0939 MULE 9.00E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0939 - - ahf:112709549 1867.43