Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0933 ATGGATCCAATTACAGCACACGGCCATTCACTTCCACCACCATTCCACACAGCAAGAGATCTGTTGCACCACCACCAGCAACAGCAGCAGCAGCAGTTTCACTCCTTACAGCAGCAGCAACAAACAGAAGACGAGCAAAGCGGAAGCAGCGGAGGCCTCAACCTCGCTCACAAGAGGGAAAGAGAAGACAACAACAACAGCGATGGAAAAGACGGAACACCTGGAGGAGGAGGAGGAGGATCCGGTGAAACAGAAATGACAAGAAGACCAAGAGGAAGACCAGCTGGATCCAAGAACAAACCCAAGCCACCGATCATCATCACCCGCGACAGTGCCAATGCCCTAAAGACGCACGTCATGGAGGTTGCAGACGGTTGCGACATCGTTGAGAGCGTCTCAAACTTCGCAAGGAGGCGCCAAAGAGGGGTTTGCATCATGAGCGGCACCGGCACCGTCACCAACGTCACACTCCGCCAACCAGCATCCTCTGGAGCCGTCGTCTCCCTCCATGGAAGGTTCGAGATCTTGTCCCTGGCGGGATCCTTCCTCCCTCCTCCCGCTCCACCTGCGGCCTCCGGCTTGACCATATATCTAGCCGGAGGGCAAGGGCAGGTGGTCGGAGGGAGTGTGGTGGGGACACTGATTGCTTCCGGCCCGGTGGTCATCATGTCCGCTTCCTTCAGCAACGCTGCGTATGAGAGACTTCCTTTGGAGGAAGAGGACCCTTCCATGCCCTTGCAAGGGTCTGGCGGTGGCGGCTCAATCGGGTCCCCCGGTGGTGGTCAGCAGCATGCGCAGCAGCAGCAACAGCAGCAGATGTTAGGAGACGCAACTGCTCCACTCTTCCATGGTTTGAATCCGAATCTTCTGAATTCAGTTCAGATGCCAACGGAAGCTTTCTGGAATACTCCTGGTCGCTCTCCTTATTGA 930 0.5624 MDPITAHGHSLPPPFHTARDLLHHHQQQQQQQFHSLQQQQQTEDEQSGSSGGLNLAHKREREDNNNSDGKDGTPGGGGGGSGETEMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMSASFSNAAYERLPLEEEDPSMPLQGSGGGGSIGSPGGGQQHAQQQQQQQMLGDATAPLFHGLNPNLLNSVQMPTEAFWNTPGRSPY* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0933 309 Pfam Plants and Prokaryotes Conserved (PCC) domain 116 229 IPR005175 -
Ahy5g0933 309 SUPERFAMILY AF0104/ALDC/Ptd012-like 112 242 - -
Ahy5g0933 309 MobiDBLite consensus disorder prediction 240 274 - -
Ahy5g0933 309 MobiDBLite consensus disorder prediction 259 274 - -
Ahy5g0933 309 PIRSF ESCAROLA 18 308 IPR014476 GO:0003680
Ahy5g0933 309 MobiDBLite consensus disorder prediction 1 106 - -
Ahy5g0933 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 309 - -
Ahy5g0933 309 Gene3D - 115 243 - -
Ahy5g0933 309 MobiDBLite consensus disorder prediction 24 53 - -
Ahy5g0933 309 CDD DUF296 116 183 IPR005175 -
Ahy5g0933 309 ProSiteProfiles PPC domain profile profile. 112 249 IPR005175 -
Ahy5g0933 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 309 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0933 Ahy-Chr5 13193876 13195829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0933 1 309 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 56.812 3.25e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0933 - - gmx:100781436 426.787