Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy5g0916 | ATGGCCTCCATTCTTCAATGTCGTGGCTGCTTTCTGATTGCTTTTACATGCATCTTCGCAACATTCATGGGGGAGTCAAAAGTAGCAATGGCAACATTTCGACCAAGTAGCTGGGCTCTTGCACATGCTACCTTTTACGGTGATGAAACAGCTTCTGCCACCATGGGAGGTGCATGTGGGTACGGGAACTTGTTTCAAAGCGGTTACGGGACGGACACGGCAGCATTGAGCTCAAGGTTGTTCAACAACGGGTATGCGTGCGGGACATGTTACCAGATAAAGTGCTACCAATCAAGTGCATGCTATAACAACGTGGCCTTCACAACCGTCACCGCCACCAATCTTTGCCCTCCAAATTGGTCCGAGCCCTCCGATGACGGTGGTTGGTGCAACCCTCCGCGAGCCCATTTTGACCTGTCCAAGCCGGTCTTCATGAAAATTGCCCAGTGGAAGGCCGGCATAGTCCCCATTCTATACCGCAGAGTGCCATGCCAAAGAAAGGGAGGGCTTCGATTTAATTTCCAAGGGAATGGATACTGGCTATTGGTGTATGTGATGAACGTGGGAGGCGGAGGAGACATTGCGAGCATGTGGGTGAGAGGAAGCAGAACGGGATGGATTCAGATGAGCCACAACTGGGGGGCTTCGTACCAAGCATTTGCGACTCTGGCTGGGCAATCTCTGTCTTTCAGGGTTACTTCTTACACTACTAAAGAGACTATTATTGCATGGAATGTTGCTCCTTCTAATTGGAACTATGGACTCACTTACTCCTCCGCTGCCAATTTCAGATAA | 795 | 0.5006 | MASILQCRGCFLIAFTCIFATFMGESKVAMATFRPSSWALAHATFYGDETASATMGGACGYGNLFQSGYGTDTAALSSRLFNNGYACGTCYQIKCYQSSACYNNVAFTTVTATNLCPPNWSEPSDDGGWCNPPRAHFDLSKPVFMKIAQWKAGIVPILYRRVPCQRKGGLRFNFQGNGYWLLVYVMNVGGGGDIASMWVRGSRTGWIQMSHNWGASYQAFATLAGQSLSFRVTSYTTKETIIAWNVAPSNWNYGLTYSSAANFR* | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy5g0916 | 264 | Pfam | Expansin C-terminal domain | 171 | 248 | IPR007117 | - | |
Ahy5g0916 | 264 | Gene3D | - | 23 | 165 | IPR036908 | - | |
Ahy5g0916 | 264 | Gene3D | - | 169 | 264 | IPR036749 | - | |
Ahy5g0916 | 264 | SUPERFAMILY | Barwin-like endoglucanases | 37 | 187 | IPR036908 | - | |
Ahy5g0916 | 264 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 56 | 169 | IPR007112 | - | |
Ahy5g0916 | 264 | PRINTS | Expansin signature | 108 | 118 | IPR002963 | GO:0009664 | |
Ahy5g0916 | 264 | PRINTS | Expansin signature | 68 | 82 | IPR002963 | GO:0009664 | |
Ahy5g0916 | 264 | PRINTS | Expansin signature | 127 | 144 | IPR002963 | GO:0009664 | |
Ahy5g0916 | 264 | PRINTS | Expansin signature | 180 | 201 | IPR002963 | GO:0009664 | |
Ahy5g0916 | 264 | PRINTS | Expansin signature | 144 | 157 | IPR002963 | GO:0009664 | |
Ahy5g0916 | 264 | PRINTS | Expansin signature | 245 | 261 | IPR002963 | GO:0009664 | |
Ahy5g0916 | 264 | PRINTS | Expansin signature | 168 | 180 | IPR002963 | GO:0009664 | |
Ahy5g0916 | 264 | PANTHER | EXPANSIN | 2 | 263 | - | - | |
Ahy5g0916 | 264 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 179 | 259 | IPR007117 | - | |
Ahy5g0916 | 264 | PRINTS | Expansin/Lol pI family signature | 77 | 95 | IPR007118 | GO:0005576 | |
Ahy5g0916 | 264 | PRINTS | Expansin/Lol pI family signature | 152 | 168 | IPR007118 | GO:0005576 | |
Ahy5g0916 | 264 | PRINTS | Expansin/Lol pI family signature | 55 | 73 | IPR007118 | GO:0005576 | |
Ahy5g0916 | 264 | PRINTS | Expansin/Lol pI family signature | 245 | 259 | IPR007118 | GO:0005576 | |
Ahy5g0916 | 264 | PRINTS | Expansin/Lol pI family signature | 37 | 52 | IPR007118 | GO:0005576 | |
Ahy5g0916 | 264 | PRINTS | Expansin/Lol pI family signature | 206 | 220 | IPR007118 | GO:0005576 | |
Ahy5g0916 | 264 | SUPERFAMILY | PHL pollen allergen | 166 | 259 | IPR036749 | - | |
Ahy5g0916 | 264 | Pfam | Lytic transglycolase | 73 | 159 | IPR009009 | - | |
Ahy5g0916 | 264 | PANTHER | EXPANSIN-A15 | 2 | 263 | IPR002963 | GO:0009664 | |
Ahy5g0916 | 264 | SMART | dpbb_1 | 73 | 159 | IPR007112 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy5g0916 | Ahy-Chr5 | 12992091 | 12993649 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy5g0916 | 15 | 264 | Expansin Gene Family | AT1G12560 | 67.600 | 7.68e-128 | 361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy5g0916 | - | - | gmx:100807807 | 474.937 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g1627 | 11 | 85177200 | 85181830 | Ahy5g0916 | 5 | 12992091 | 12993649 | PCT |