Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0895 ATGGAAGCTTCGTTGGAAGGCTCCAGGATGTTCTTGGCAAAGCTTCTTATGACTATATACAGTAAGGAATGCTTGAAATTAAAGCTCGGCTCAACCTTGGAAGAATTGATAAGGGAGGAGGAGAAGAAAAAAGAGAAAATCAACAGGAAGGACTATTGGTTGCGTGAGGGAATCATTGTTAAGGTTATGAGCAAGGCCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTGGTGAGAAAGGTGATTGACAAATATGTTGGGGAAATTGATATGCTTGAAAGCAAGCATGTGCTGAGAGTCGATCAGGAAGAGCTTGAAACTGTGATTCTACAAGTTGGGGGCCGTGTAAAAATTGTCAATGGTGCATATCGTGGATCAACTGCGAAACTTTTGGGAGTGGATACGGATCATTTTTGTGCAAAGGTGCAGATAGAGAGAGGTGCCTATGATGGCAGGGTACTCAAAGTTGTGGAATATGAAGACATTTATAAAATAGCACAATGA 507 0.4221 MEASLEGSRMFLAKLLMTIYSKECLKLKLGSTLEELIREEEKKKEKINRKDYWLREGIIVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIDMLESKHVLRVDQEELETVILQVGGRVKIVNGAYRGSTAKLLGVDTDHFCAKVQIERGAYDGRVLKVVEYEDIYKIAQ* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0895 168 CDD KOW_KIN17 113 166 IPR041995 -
Ahy5g0895 168 Pfam KN17 SH3-like C-terminal domain 49 102 IPR041330 -
Ahy5g0895 168 Gene3D - 112 167 IPR014722 -
Ahy5g0895 168 SMART kow_9 110 137 IPR005824 -
Ahy5g0895 168 Coils Coil 30 50 - -
Ahy5g0895 168 Gene3D - 57 110 - -
Ahy5g0895 168 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 31 168 IPR037321 -
Ahy5g0895 168 PANTHER - 31 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0895 Ahy-Chr5 12650469 12653214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0895 31 167 C2H2 Transcription Factor Family AT1G55460 80.292 1.19e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0895 K13102 - adu:107488077 308.531