Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0887 ATGGGTAAGGCAACAAAATGGTTTCGCGGGCTTTTTGGTCTCAGAAGGTCTTCTGACTCTGCACCACCACCCTCTACCGCCGCTCCAAAACCACACAAAGACAAACGCCGTTGGAGCTTCGTTAATTCTTACAGAGAGAATAAGAACCTCCACCAACATCGCCATCAAGTACGACTCCATGCTTCTTCTGCTCATGACCCTGCCATCGAGGTGGTAGCCGCCGCTGGACTCAAAAGCAGCGGCAGCGGCAGCGGCAGCGGCGGCAGAAGTGCCGTCTCTCGCGAAGAATGGGCAGCCGTTAAGATTCAGGCGGCGTTTCGAGGCTGTTTGGCAAGGAGAGCACTAAGAGCCTTAAAAGGATTGGTGAAGCTGCAAGCGTTGGTGAGAGGTCACATTGAGAGGAAGCGCACTGCACAGTGGCTGCAAAGAATGCAAACTCTCTTACGAGCTCAGGCCCGTGCCCGTGCCTGCCGGGCCCAAATTTTGCAGGCCCCTCACTTCCATGTTCCAGCAACACCAGAGAAATTTGAAACACCAGTCCGTTCTTCCAGCATGGAATATAATCACTCGCCATCAGTACTCAAGAGAAATGGTTCTAGATCCCATGTCACCATTGGCAATCGAGAGATAGAACGATCGTGGACGCAACGAAGATCATGGACAAGGACTTGTAGCATGGATGATGAAAGAAGCGCGGGGATTTTCGAAATTGACTCTGGAAAAGCACACAAAAATTCGAAACGCGGAAATCTCTTCGACTCGACGAGTCAGCCATTGGTTTCAGATCATTACAGGCAGAGTTTCGCCACCACAAGGGACTCAACATCTCATCAATCGGGTCATAGTCCATATTCCTGTGAAGTTGAGGAGAATTCAGTGTGTGATGCTGTCAATTTTACTTATACTCCCACAAAGAGTGACGGCTCTAATAGAAGCTACCTAAGTAGTGGTTGTTGTGAGTACTATCTAAGTTACATGGCTTACACTGAATCTTCCAAAGCCAAGGTAAGATCTTTGAGTGCACCAAAACAAAGACTCCAATATGAGAGGTGTGGTTCATTCAATAGGTTCTCGCAAACACAAAGGGTATCATCTACAATGCGTGCAAGCTTCACTAGCAAAGCCTATCCAGGTTCTGGGCATTTGGACAACCTTGGATTGCCCCTCGGATATAGATACTGA 1182 0.4873 MGKATKWFRGLFGLRRSSDSAPPPSTAAPKPHKDKRRWSFVNSYRENKNLHQHRHQVRLHASSAHDPAIEVVAAAGLKSSGSGSGSGGRSAVSREEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQWLQRMQTLLRAQARARACRAQILQAPHFHVPATPEKFETPVRSSSMEYNHSPSVLKRNGSRSHVTIGNREIERSWTQRRSWTRTCSMDDERSAGIFEIDSGKAHKNSKRGNLFDSTSQPLVSDHYRQSFATTRDSTSHQSGHSPYSCEVEENSVCDAVNFTYTPTKSDGSNRSYLSSGCCEYYLSYMAYTESSKAKVRSLSAPKQRLQYERCGSFNRFSQTQRVSSTMRASFTSKAYPGSGHLDNLGLPLGYRY* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0887 393 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Ahy5g0887 393 Pfam IQ calmodulin-binding motif 122 136 IPR000048 GO:0005515
Ahy5g0887 393 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 388 - -
Ahy5g0887 393 Gene3D - 96 137 - -
Ahy5g0887 393 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Ahy5g0887 393 MobiDBLite consensus disorder prediction 15 35 - -
Ahy5g0887 393 MobiDBLite consensus disorder prediction 178 198 - -
Ahy5g0887 393 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Ahy5g0887 393 Pfam Protein of unknown function (DUF4005) 302 368 IPR025064 -
Ahy5g0887 393 PANTHER IQ-DOMAIN 5-RELATED 1 388 - -
Ahy5g0887 393 SMART iq_5 94 116 IPR000048 GO:0005515
Ahy5g0887 393 SMART iq_5 117 138 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0887 Ahy-Chr5 12510897 12514156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0887 68 393 IQD Protein Family AT4G23060 38.606 1.79e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0887 - - ahf:112800814 700.279