Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0876 ATGTCAAACAGAAAATCCAATAAGGTTGCACAAGCGGTTGTTCTGAAGCAGATTCTGAAGAGGTGTTCAAGTTTTGGAATGAAGCATAATAATAATGAAGAGGGTCTCCCTGATGATGTACCAAAAGGTCATTTTGCAGTGTATGTTGGTGAGAACAGAAGCAGGTACATTGTTCCAATATCATGGCTTGCTCATCCACGGTTTCAAATTCTTCTCCAAAGAGCTGAAGAGGAGTTTGGTTTCAATCATGACATGGGACTCACCATTCCCTGTGATGAAGTTGCTTTTGAGTCCTTAACCTCAATTATCAGATATTAA 318 0.3962 MSNRKSNKVAQAVVLKQILKRCSSFGMKHNNNEEGLPDDVPKGHFAVYVGENRSRYIVPISWLAHPRFQILLQRAEEEFGFNHDMGLTIPCDEVAFESLTSIIRY* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0876 105 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733
Ahy5g0876 105 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 104 - -
Ahy5g0876 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0876 Ahy-Chr5 12336912 12337605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0876 5 103 Calmodulin-binding Proteins AT4G34750 44.444 2.57e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0876 K14488 - gmx:100798840 188.348