Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0872 ATGAAGCGGGCAAGGAAATCGAAATCGAACAGGGTTTCGTGGGCTCCTGCGTCTAATTTGTGTCAGATCAAATTGTTTCTGTCTGACGACTGTCCTTCAAAAGTTGGACTGAAATCTCAAGATCATCTTCAAGCAAAGACATCTTCAATGTTGCCTTCAAGTACTAATGAACATATGGACTTACCTCCTGGATTTGAAGACAATCACTTCTTAAACCAGCCAAAGGTTGAACTCTCTCGCATCTCTCCGATTAAATGGGAGCGCCCTCCTCTGTTTGCTTTCAGACATGATTGGCGTGTTGCTGCTGGTGAAGAAAGTAAGGAGAAAATGGATCAAAAGCTAAGAGAAATGAAAGTGCTTGAAGCAGTTTATCCTCGCATTTCTGCCATACCTCCCAGCCCTTCTGTTTCTCATGATGTAGACAAGGAAGGTTATGATGATAACCACACTCCTCTCATCCCTATCATTCCCATTGAGGAGGAGGATTCGATGGATATTAATCCTGAAGTGTCAGACGCAAAACTCGCAGATACCCCCACTAAGTTGCTGTCACAAAACTTGCAGCAATATATAGCAGCTGCAACACCTATTAATTCACAATGCAACACCTCTGCTGCTGTTCCCTTATCTGCAGGTGGAAACTCCATGCTGGCAATTTCTCCTGGTTCGGAACCAGATTTAGCTGCAGCCTCAGCTCTGGTAGCAGCAGCCATTTTGAAGAGTAATGAGCAAGGAAACCCAATTGATATGGATCTACTTGTTAAAATATTTAATGACCCAATAATGATAGAGAAATTGGTTAACCAACGGGGAACTGCAACCGCCACCATAACTACCTCTTCAACTACTGGGTTGAAATCTGCTGCTTCTGGGACTACACCCACAAGCACAGTTGGTTTAGTTCCTTCTTCTGCTCCAAAGCAAGCAACTTCCTTAGCCTCCATGTTGATACCTACACTTAATAAGCCAGCAATTCCCCCAGTTCCATTATCTAGTCCTTCCTCTGGTAATTTAGCAACTAGCTCAATTACCCTGCCTCCACAACCAACTACACAATCACCTTCACCTCCACCTCCATCCACTTCTACATTTAATAAGCACAGGTCTGTCAACAATAATGTTCACCATGTAACGAATGGAGCACTTCCCTCTTTAGAACCCCAGCCTCCTCCTCAAGATACAACTCTGTTATCTGGTATAAAGCGCACGTCATCATTACCTTGTGTGAATTCATCCAGTGAATTGAGCACAGTGTCTTTGAATTCAACTGCTGTGAATTTGCATGCAGGTGCAAACCAGGTGCGATCAACGGCTGCCACAGTGGCTTATCAAACAAGTAGCACCGGTTCTTCTTTTGCAGTGAAGGATGCCAACTATTATAAGAACCTTATTAGGCAACATGGTGCAGATAAGCAAGATGGTCAAGAATCACTAATAGGTATCCGTCATAATAATTTCCAAGACTTTAAAATGGTACATAACCTTAAACAAAGGGAAGTGATATTCAAAAACCAGAAACCTTGCATATACTTTAACAGCTCAAGGGGTTGCCGAAATGGTGCAAATTGCCCCTATCAGCATGATATCTCAGCTCAGTGGGGAGCTGGTAATGACCTAGTGGCACAAAATGCAAAAAGAATGAAACTAGGTACAGAAGTTAATGGGAGGATATAA 1674 0.4295 MKRARKSKSNRVSWAPASNLCQIKLFLSDDCPSKVGLKSQDHLQAKTSSMLPSSTNEHMDLPPGFEDNHFLNQPKVELSRISPIKWERPPLFAFRHDWRVAAGEESKEKMDQKLREMKVLEAVYPRISAIPPSPSVSHDVDKEGYDDNHTPLIPIIPIEEEDSMDINPEVSDAKLADTPTKLLSQNLQQYIAAATPINSQCNTSAAVPLSAGGNSMLAISPGSEPDLAAASALVAAAILKSNEQGNPIDMDLLVKIFNDPIMIEKLVNQRGTATATITTSSTTGLKSAASGTTPTSTVGLVPSSAPKQATSLASMLIPTLNKPAIPPVPLSSPSSGNLATSSITLPPQPTTQSPSPPPPSTSTFNKHRSVNNNVHHVTNGALPSLEPQPPPQDTTLLSGIKRTSSLPCVNSSSELSTVSLNSTAVNLHAGANQVRSTAATVAYQTSSTGSSFAVKDANYYKNLIRQHGADKQDGQESLIGIRHNNFQDFKMVHNLKQREVIFKNQKPCIYFNSSRGCRNGANCPYQHDISAQWGAGNDLVAQNAKRMKLGTEVNGRI* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0872 557 MobiDBLite consensus disorder prediction 331 348 - -
Ahy5g0872 557 MobiDBLite consensus disorder prediction 281 303 - -
Ahy5g0872 557 MobiDBLite consensus disorder prediction 327 397 - -
Ahy5g0872 557 ProSiteProfiles Zinc finger C3H1-type profile. 502 530 IPR000571 GO:0046872
Ahy5g0872 557 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 549 - -
Ahy5g0872 557 MobiDBLite consensus disorder prediction 362 379 - -
Ahy5g0872 557 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0872 Ahy-Chr5 12301236 12306459 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy5g0872 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0872 - - adu:107488052 1045.8