Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy5g0851 | ATGGGTCGTGGAAAGATTGAGATAAAGCTCATCGAGAACCCAACCAACAGGCAAGTTACATACTCAAAGAGAAGGAATGGTATCTTCAAGAAAGCTCATGAACTCAGTGTTCTCTGTGATGCTAAGGTCTCACTCATCATGTTCTCCAAGAACAACAAGATGCACGAGTACATCAGCCCTGGCCTTAGCACAAAGAAGATCATTGATCAGTATCAGAAAACTTTGGGAGATATCGATCTCTGGCATTCTCACTATGAGAAAATGCTTGAGAATTTGAAGAAACTCAAAGATATTAATAATAAGCTCAGAAGACAGATCAGGAATCGGATAGGGGAGGGTAGCTTGGATATGGATGATATGAGCTTTCAGCAACTGCGTACTCTTGAAGAGGATATGGTTTCTGCCATTGCCAAAATACGCGAACGAAAGTTCCATGTGATCAGAACTCGGACTGAAACCTGTAGGAAAAAGGTGAGAAGCTTGGAGCAGATGAACGGAAATCTCCTTCTTGAACTTAAGGAAAAGTGTGTGATCCATCCACAATTTATATTACACGATGAAGGAGAGCAGGAATCAGCAGTTGCACTGGCCAATGGAGCCTCCAACCTCTATGCATTCTGCCACCACCATACTCATCTCAATCACCACCTTCATAACCACCATGCACCACCGGAACCCTTCAAAAACGATGATCTCCGCCTCGCTTAA | 708 | 0.4336 | MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYISPGLSTKKIIDQYQKTLGDIDLWHSHYEKMLENLKKLKDINNKLRRQIRNRIGEGSLDMDDMSFQQLRTLEEDMVSAIAKIRERKFHVIRTRTETCRKKVRSLEQMNGNLLLELKEKCVIHPQFILHDEGEQESAVALANGASNLYAFCHHHTHLNHHLHNHHAPPEPFKNDDLRLA* | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy5g0851 | 235 | Coils | Coil | 85 | 105 | - | - | |
Ahy5g0851 | 235 | Gene3D | - | 13 | 79 | IPR036879 | GO:0003677|GO:0046983 | |
Ahy5g0851 | 235 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Ahy5g0851 | 235 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Ahy5g0851 | 235 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Ahy5g0851 | 235 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 1 | 234 | - | - | |
Ahy5g0851 | 235 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Ahy5g0851 | 235 | SUPERFAMILY | SRF-like | 2 | 96 | IPR036879 | GO:0003677|GO:0046983 | |
Ahy5g0851 | 235 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Ahy5g0851 | 235 | ProSiteProfiles | K-box domain profile. | 85 | 178 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Ahy5g0851 | 235 | MobiDBLite | consensus disorder prediction | 216 | 235 | - | - | |
Ahy5g0851 | 235 | CDD | MADS_MEF2_like | 2 | 77 | IPR033896 | GO:0000977|GO:0045944 | |
Ahy5g0851 | 235 | Pfam | K-box region | 82 | 171 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Ahy5g0851 | 235 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Ahy5g0851 | 235 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 11 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Ahy5g0851 | 235 | MobiDBLite | consensus disorder prediction | 218 | 235 | - | - | |
Ahy5g0851 | 235 | PANTHER | FLORAL HOMEOTIC PROTEIN DEFICIENS ISOFORM X1 | 1 | 234 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy5g0851 | Ahy-Chr5 | 11638468 | 11640421 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy5g0851 | 1 | 230 | MADS-box Gene Family | AT3G54340 | 47.186 | 1.08e-65 | 201 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MADS-MIKC | Ahy5g0851 | K-box | 1.10E-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy5g0851 | K09264 | - | gmx:100784496 | 386.726 |