Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0831 ATGTCGATGGAACAAGCAATTTGTGAAGGCGCATTGTACGGTACAACATATGATAATATTGATCAGTATAATTCTTGCGACGTTAATGTTCCATCGCTTAGTGAAGATGACACACATCATGTGGACAAGGGGAAAGATTCTGGAAGCGTTATTGAAGTAGTGGACGATGCAATGGCAGTGAATAATGAGTTACCCGATCACACTGGAATTCCATTAGATGAAATCCCGTACGTAGGATTGAGATTTGTTTCCTTGCAGCGGGCACAAGAGTTTTATACTAATTATGCAAAGAAAGTTGGCTTCGTGACCAGGATTAGGAACACCAACTTTGACAAGACCAGGAAGGATTCAATGATACCTGTTAACCAATCGTTACACTGTAGTTGTGAAAGTTATCGGGAGTCTCGAGTGAAGGCAGCAACTCGGGTAAAGCGAATAATAACAGCCGGATGCAAAGCAAGGATGTACGTCATGCTTGATAGACAGAAGGATAATTGGATGGTCTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAGCAAGCTATGCACTACATTGAGTACAGGGAACTGACCATGCATGTCAAGTGTGTGATTCAGAACAACGATGAGGCTGGCATACGGCCTAATAAGACTTATCTCGCACTGCCGAACGAGGTTGGTGGCTCATCGAATTTGGGTTACTCAGAAAAGGATGTGAGGAACTTCATTACGAGCAATTTGCGCTGTGCTGATAGAAACACAGATGTCAAGGAAATGATTAGCTATTTCATGCGAATGAAAGATATCAACTCGAATTTTTTTTATGCAGTTGATGTAGACGAAGCTAACCAGTTTAAAAGAGCGCTCTGGGTAGATGTAAGATGTAGGGCTTCCTATGAATATTATGGTGATGTGGTGCCATTTGATACAATGTACAGTAGAAACAAGCATGGACTTCCATTTGCATCTTTTGTTGGCGTTAACCATCATGGCAAGTCCACTCTGCTCGGATGTGCTTTGATGGGAAATGAGAAAATTTGTTGCTTCGAGTGGGTCTTTAAGCAATGTCTGAGGTGCATGGGATCTCCCCCACAGGCCATCATCACGGACCAGTGCAAATCCATGTTTGGTGCTATCAAGAATGTCCTTCCAGATACTCGCCACCCTGGTGCATATGGCACATAA 1173 0.4331 MSMEQAICEGALYGTTYDNIDQYNSCDVNVPSLSEDDTHHVDKGKDSGSVIEVVDDAMAVNNELPDHTGIPLDEIPYVGLRFVSLQRAQEFYTNYAKKVGFVTRIRNTNFDKTRKDSMIPVNQSLHCSCESYRESRVKAATRVKRIITAGCKARMYVMLDRQKDNWMVSKLELKHTHPCSAKQAMHYIEYRELTMHVKCVIQNNDEAGIRPNKTYLALPNEVGGSSNLGYSEKDVRNFITSNLRCADRNTDVKEMISYFMRMKDINSNFFYAVDVDEANQFKRALWVDVRCRASYEYYGDVVPFDTMYSRNKHGLPFASFVGVNHHGKSTLLGCALMGNEKICCFEWVFKQCLRCMGSPPQAIITDQCKSMFGAIKNVLPDTRHPGAYGT* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0831 390 Pfam FAR1 DNA-binding domain 90 179 IPR004330 -
Ahy5g0831 390 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 384 IPR031052 GO:0006355
Ahy5g0831 390 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 41 384 - -
Ahy5g0831 390 Pfam MULE transposase domain 301 384 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0831 Ahy-Chr5 11364521 11366295 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g0831 FAR1 7.10E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0831 - - ahf:112803266 812.372