Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0799 ATGAATGATCTGATGACGAAATCGTTCTTAAGTTATGTTGAACTGAAGAAACAGGTCATGAAGGACCTTGAAAATGAACGTGATATTGAAGCAGGGCAACTCAACCCCACACAACTAGAAGACCCTAATCTCACTCAGTTCTTCCAAGAAGTGGATGCAATCAAGGTTGAAATGGAAGAGATCACCAATCTCTTATTTGATCTTCAGCAACTGAATGAAGAAGCAAAGTCCACACACAGTGCAAAAGTCCTCCGTGGACTAAGAGACCGCATGGAATCTGACATGGTTGCGGTGCTTCGCAAGGCCAAGATCATCAAGGCAAGGCTTGAGGTCCTGGATCAATCCAACATAGCCAATAGAACTTTATCAGAGTCCTATAAAGAGGGTACACCAATTGATAGGACAAGGAGTTCTGTCACAAATGGTTTGAGGGTCAAGCTTAGGGACATGATGAATGAGTTTCAGTCCTTGAGGGACAAGATACTGTCTGATTACAAGGAAGATTTGAAGAGAAGGTACTACAGCGCGACCGGCGAGGTTCCGAGTGAGGAGGTCATGGACAAGATGATCTCAGGGAGTCTCAAAGTTGAGTTTTTGGCTGGGAAAACAGATGCTGACATGGGAAATCAGGTTAGACATGAGGCTGTGATGGATATTCAGAGGAGTTTGAACAAGCTTCACCAAGTGTTTCTTGATATGGCTATTCTGGTTGAGACACAAGGGGAGAAATTGGACAATATTGAAGATAATATGGCCAGTGCTGGTAACTACATCCATGGTGGAACTAATAGTCTTTACTATGCCAATCAGATGAAGAAGAAGAACCATAAATGGTGGTGCTGGGTTTGTGCTGTTGGGTTGATTGTGCTGTTGGTGTGCTTCATAGCAATGTTGACTTCTTGA 903 0.4341 MNDLMTKSFLSYVELKKQVMKDLENERDIEAGQLNPTQLEDPNLTQFFQEVDAIKVEMEEITNLLFDLQQLNEEAKSTHSAKVLRGLRDRMESDMVAVLRKAKIIKARLEVLDQSNIANRTLSESYKEGTPIDRTRSSVTNGLRVKLRDMMNEFQSLRDKILSDYKEDLKRRYYSATGEVPSEEVMDKMISGSLKVEFLAGKTDADMGNQVRHEAVMDIQRSLNKLHQVFLDMAILVETQGEKLDNIEDNMASAGNYIHGGTNSLYYANQMKKKNHKWWCWVCAVGLIVLLVCFIAMLTS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0799 300 Pfam SNARE domain 242 292 IPR000727 -
Ahy5g0799 300 SUPERFAMILY t-snare proteins 41 261 IPR010989 GO:0016020|GO:0016192
Ahy5g0799 300 PANTHER SYNTAXIN 3 296 IPR045242 -
Ahy5g0799 300 Pfam Syntaxin 46 241 IPR006011 GO:0016020
Ahy5g0799 300 Coils Coil 54 78 - -
Ahy5g0799 300 Gene3D - 203 299 - -
Ahy5g0799 300 SMART SynN_4 39 166 IPR006011 GO:0016020
Ahy5g0799 300 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 206 268 IPR000727 -
Ahy5g0799 300 PANTHER SYNTAXIN-112 3 296 - -
Ahy5g0799 300 CDD SNARE_syntaxin1-like 210 265 - -
Ahy5g0799 300 CDD SynN 47 194 IPR006011 GO:0016020
Ahy5g0799 300 SMART tSNARE_6 199 268 IPR000727 -
Ahy5g0799 300 Gene3D - 40 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0799 Ahy-Chr5 10859970 10861798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0799 1 300 SNARE and Associated Proteins AT2G18260 58.958 4.53e-131 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0799 K08486 - gmx:112997615 505.753