Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0766 ATGTCTTCCTCCAATTCTTCAACACTCTCACCACCCTCTGACGATGATACTCCCTCTTCTGATCAGAGCCCACCATCACCCTCATCGTCATCACCCTCGCCACCATCCTCGTCCACCCAAGATGATTCTGATGATTCTTCATCATCATCACCACCACCATCACCGCCATCACCGCCATCACCGCCGCCACCCTCCCAAGATTCCTCCTCCCCGTCATCATCATCACCTCCAGCGCCGTTACCACCCACGCCAGCCTCACAAGATTCCTCTCCTCCTGCTACCCGACCTCCAGGATCATCCTCCGGCGAGGCATTAGTACCGTCTCCTCCAGGAACCTCACCATCAGGGTCTAAGGGTCTTGGCAATCTCTTCAGTGATGATTTGGGACACATTGTAGCATACGTTTCAATAGGAGTTTTTTTTCTTATCCTTCTCATTATTGCCATTGTTTGCATAAGAAGAAGGTCCAAAAAGAAGAAGCAGCAACAACAACAGAAGTTGTACTACTATGGTGGAGATGCACCTGATCAACAAAAAACTAACTACTACTACAACAACAACAATGGTGGGAAGAATCAAAATTACTACGGAGGAGGTGGTGGTCCAGCAAATCAAGAACATGTAGTGAGGATGCCAAATGGAATGATAGGGATGGGAATGGTTCCGGGTCCTAACGCCGGTGTTGGTGCTGCTTGGGGTGCACAGCAACCTCCTCAGATGATTATGTCAAACGGCTCAGACTTGAGCTCGAATTTCTCGATGGGGCCTCCGCCTCTGCCTCCTCCGTCACCGGGTATTACATTAGGCCTCAAGGCTGGCACCTTCACCTACGAAGAACTCGCAGCAGCAACAGGAAACTTTGCAGATGCAAACATGATAGGCCAAGGTGGATTCGGTTACGTCTACAAGGGAGTGTTCCCTAACGGAAAGGAGGTAGCCGTTAAGACTCTCAAGGCCGGTAGCGGTCAAGGCGAGCGCGAGTTCCAGGCTGAGATTGAGATCATCAGCCGTGTTCATCATCGCCACCTTGTTTCTCTTGTTGGTTACTGCATTGCTGGTGGCCAGAGAATGTTGGTCTATGAATTCATCCCTAATAACACCTTGGAATATCACCTTCATGGTAAGGATCTTCCTACCATGGATTGGCCTACCAGAATGCGCATTGCCATTGGAGCTGCTAAGGGACTTGCTTATCTTCATGAAGATTGTCATCCTCGCATCATCCATCGTGACATCAAAGCTGCCAATGTCCTTATTGATAGTAGCTTCGAAGCAAAGGTGGCTGATTTCGGATTGGCTAAGCTGACGACAGATAATAACACTCATGTTTCAACTCGTGTCATGGGAACATTCGGGTACTTAGCTCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAGTCTGATGTATTCTCGTTTGGAGTGATGCTATTAGAAATCATAACCGGGAAGCGCCCTGTGGATCTCTCAGGTGCCATGGATGACAGCTTAGTTGACTGGGCGCGGCCACTACTGATACGTGGGTTGGAGGAAGACGGCAACTTTGGAGAATTGGTAGATCCATGTTTGGAAGGAAACTACAACAAACAAGAAATGACAAGAATGGCAGCTTGCGCTTCTTCCAGCATCCGTCACTCTGCCAAGAAGCGTCCAAAAATGAGTCAGATTGTAAGGGCGTTGGAAGGAGATGTGTCATTGGATGACTTGAAGAATATGGGTAAGGCAGGTGCAATTGGTGGTAGCGGTGGTGGTGTCCTGAACCCTTCAGGAGGAGGGAGCAGTGACTATGACACAATGCAGTACAATGCTGATTTACAAAAGTTCAGAAAAACGGTGTTTTCAAGCCCGGAAAACACAAGCGGTAGTAGTGGTGAGAGGCCTTAA 1884 0.4857 MSSSNSSTLSPPSDDDTPSSDQSPPSPSSSSPSPPSSSTQDDSDDSSSSSPPPSPPSPPSPPPPSQDSSSPSSSSPPAPLPPTPASQDSSPPATRPPGSSSGEALVPSPPGTSPSGSKGLGNLFSDDLGHIVAYVSIGVFFLILLIIAIVCIRRRSKKKKQQQQQKLYYYGGDAPDQQKTNYYYNNNNGGKNQNYYGGGGGPANQEHVVRMPNGMIGMGMVPGPNAGVGAAWGAQQPPQMIMSNGSDLSSNFSMGPPPLPPPSPGITLGLKAGTFTYEELAAATGNFADANMIGQGGFGYVYKGVFPNGKEVAVKTLKAGSGQGEREFQAEIEIISRVHHRHLVSLVGYCIAGGQRMLVYEFIPNNTLEYHLHGKDLPTMDWPTRMRIAIGAAKGLAYLHEDCHPRIIHRDIKAANVLIDSSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEIITGKRPVDLSGAMDDSLVDWARPLLIRGLEEDGNFGELVDPCLEGNYNKQEMTRMAACASSSIRHSAKKRPKMSQIVRALEGDVSLDDLKNMGKAGAIGGSGGGVLNPSGGGSSDYDTMQYNADLQKFRKTVFSSPENTSGSSGERP* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0766 627 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 24 618 - -
Ahy5g0766 627 Gene3D Transferase(Phosphotransferase) domain 1 363 572 - -
Ahy5g0766 627 Gene3D Phosphorylase Kinase; domain 1 267 362 - -
Ahy5g0766 627 SUPERFAMILY Protein kinase-like (PK-like) 266 560 IPR011009 -
Ahy5g0766 627 MobiDBLite consensus disorder prediction 577 598 - -
Ahy5g0766 627 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524
Ahy5g0766 627 MobiDBLite consensus disorder prediction 1 118 - -
Ahy5g0766 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Ahy5g0766 627 MobiDBLite consensus disorder prediction 49 91 - -
Ahy5g0766 627 MobiDBLite consensus disorder prediction 33 48 - -
Ahy5g0766 627 Pfam Protein tyrosine and serine/threonine kinase 291 559 IPR001245 GO:0004672|GO:0006468
Ahy5g0766 627 MobiDBLite consensus disorder prediction 1 24 - -
Ahy5g0766 627 SMART serkin_6 287 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0766 627 ProSiteProfiles Protein kinase domain profile. 287 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0766 627 PANTHER RECEPTOR-LIKE KINASE 24 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0766 Ahy-Chr5 10250451 10253777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0766 275 613 Trihelix Transcription Factor Family AT1G70460 60.882 3.04e-145 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ahy5g0766 PK_Tyr_Ser-Thr 6.20E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0766 - - ahf:112800691 983.015