Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0758 ATGAATGCACTTCTTGAAGGATTATTTGATGACGTCAAAAAAGCGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGGTGCAGTTGCTGGAGATGACGAGGGATCGCAGCTGTTATTGCTCAATGCTGCTGAGGAGTTCTATTACAAGAAATGTAGCAATGAGTTGAATGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCATGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAAGTATGGAAGAATGCTCAACCATTCATTGATTGGCTTCGGAATGCTGAATCAGAATCGGAGGAAGGATGA 354 0.4294 MNALLEGLFDDVKKAFGKEATKRKNHLAGAVAGDDEGSQLLLLNAAEEFYYKKCSNELNEVALILKALYDVDLVEEEHVMHWYSKGLKGDKKDSQVWKNAQPFIDWLRNAESESEEG* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0758 117 SUPERFAMILY ARM repeat 4 111 IPR016024 -
Ahy5g0758 117 SMART 542_3 25 113 IPR003307 GO:0005515
Ahy5g0758 117 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 116 IPR045196 GO:0003743|GO:0006413
Ahy5g0758 117 ProSiteProfiles W2 domain profile. 1 117 IPR003307 GO:0005515
Ahy5g0758 117 Pfam eIF4-gamma/eIF5/eIF2-epsilon 39 116 IPR003307 GO:0005515
Ahy5g0758 117 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 116 - -
Ahy5g0758 117 Gene3D - 1 117 - -
Ahy5g0758 117 CDD W2_eIF5 3 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0758 Ahy-Chr5 10154513 10155273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0758 1 110 Eukaryotic Initiation Factors Gene Family AT1G77840 54.054 1.04e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0758 K03262 - ahf:112800685 240.35