Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0750 ATGGCGACTATAGATGCCCATACTTTCAACAATGCCACCCCCTTCTCTCGTAATTTCAAAGTATATGTAATACGTGTGTGGGAACTCCCTAACAGATACAATGAAGGAGAAGTTGGCACCATTGAAGTGATTATTGAAGATAGTCAGGGCACAAGGTTGCAAGTCTCGATCCCTAAATCCCTGGTGAGCAAGTGGCGGGGTGTCTTGGTTCAGTTTCAAATGTACATTATGACCAACTTCATTGTTGTTGACAACCAAAAGGGTAACATATCAAGGGGAAAAACCATCCGTGAGTTACTAAATGTTGAGAAGATCGATGACTCTGCATTGTTTGACATGATTGGTGAAGTAGTTGGTAAAGAAGATCCAAAAGAGTTGATCACCAGCAAAGGAAAGGAGACTAAACGACTGACTGTTATCTTGGAGGACCTAGAAAATAATAGGATTGGGTGCACTATATTTGGTGAAATGGTTGACCAGCTACTTCGTCACATGCAAGATGGAAGGGTTGAGCCACTAATAGTTGTGGTCCAGTATTTTAAGGCAACCAGATGGAATGGCAAGACATCTGTCCAAAGCCATTTTGACATTTCACAGCTGCACATAGACTCCAACCTTAAAGATGTTGCTGAATTTAGGAGCAGGCTGCTTGGCGGTGAACCATCATCCTCTGTGAGGATTAGTCAAGTTCCATCAAAAACAGCTTGGTCAGGGGTTGAGGAGCTTAAACAAGGTGCTGTGTCAGTGAAAACAATTGAAGAAGTCCTTATCCAACATGAGGAAGGTCCAGCTTGGATTGCTGCAAGTATTGTTGCGATTAATGTTACGAAGGATGATTGGTTCTATAAATCATGTAGAAAATGTCCAAAGAAAGTAGAAACTCCTATTGGAAACAGATATGAATGTGGGAAGTGTGACCATACACATGGATCTGCAGCCCTAAGGTTCAAAGTCGAGGTGATGGTTTTTGATGGAACTGGTAGCATCCGATTGCTACTATGGGACAAGGAAACAAGTATGCTATGTGGGAAGAGAGCTGAACAGATTATGGAGGACGATGTTATAGTGGGAGATGAATATCCCAAGACACTTGATAACATGATGGAAAAAAGAGTCCTTTTCAAGATAAATATCAAAGAAGCCAACATTAATCAATTTGATCATGTGTACACGGTTATGAAAATCTGTGATGATGAGGATATCATTGACAAAAATCTTCCCAAAGAGTTGTCTACTAATCTTCCGAGTAATGTCAGTGAAGATGGCTGCAACAACTATTTGGAAATTTCAGAAAATGTGGCTAATCTTAAAACTGACTGTGATACTGAGTCTTCTATGGATGTTGTGGAGGAGTGCATCTCATCCCTCAAGTACAAAACACCATCCAAAAATATTACCAATGGATTGAAGAATTCTCCTCTAAGTCTGAATGAAGATGAGGAAGAAGGCCAGCTATCAACCAACAGGTTCAGTAGGAAGATGGGAAAGAGACAGAAATGTGTTAACCTTGATGCAGATATATGA 1524 0.4062 MATIDAHTFNNATPFSRNFKVYVIRVWELPNRYNEGEVGTIEVIIEDSQGTRLQVSIPKSLVSKWRGVLVQFQMYIMTNFIVVDNQKGNISRGKTIRELLNVEKIDDSALFDMIGEVVGKEDPKELITSKGKETKRLTVILEDLENNRIGCTIFGEMVDQLLRHMQDGRVEPLIVVVQYFKATRWNGKTSVQSHFDISQLHIDSNLKDVAEFRSRLLGGEPSSSVRISQVPSKTAWSGVEELKQGAVSVKTIEEVLIQHEEGPAWIAASIVAINVTKDDWFYKSCRKCPKKVETPIGNRYECGKCDHTHGSAALRFKVEVMVFDGTGSIRLLLWDKETSMLCGKRAEQIMEDDVIVGDEYPKTLDNMMEKRVLFKINIKEANINQFDHVYTVMKICDDEDIIDKNLPKELSTNLPSNVSEDGCNNYLEISENVANLKTDCDTESSMDVVEECISSLKYKTPSKNITNGLKNSPLSLNEDEEEGQLSTNRFSRKMGKRQKCVNLDADI* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0750 507 CDD RPA1_DBD_B_like 112 216 - -
Ahy5g0750 507 MobiDBLite consensus disorder prediction 467 481 - -
Ahy5g0750 507 MobiDBLite consensus disorder prediction 467 487 - -
Ahy5g0750 507 Pfam Replication factor-A C terminal domain 272 395 IPR013955 -
Ahy5g0750 507 PANTHER BNAC07G49340D PROTEIN 104 456 - -
Ahy5g0750 507 Gene3D - 234 405 IPR012340 -
Ahy5g0750 507 SUPERFAMILY Nucleic acid-binding proteins 249 397 IPR012340 -
Ahy5g0750 507 CDD RPA1_DBD_C 249 395 IPR013955 -
Ahy5g0750 507 PANTHER REPLICATION FACTOR A 1, RFA1 104 456 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy5g0750 507 SUPERFAMILY Nucleic acid-binding proteins 102 216 IPR012340 -
Ahy5g0750 507 Gene3D - 96 222 IPR012340 -
Ahy5g0750 507 Gene3D - 11 95 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0750 Ahy-Chr5 10068646 10071920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0750 85 334 Core DNA Replication Machinery Family AT2G06510 23.194 2.70e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0750 - - ahf:112803472 745.347