Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0749 ATGCCGGTTGATTTAGACAATGTTTCAACAGCTTCAGGGGAAGCTAGTGTTTCTTCCTCTGGCAATCAGACAGTACCTTCAAAATCAGCCACCAAGAAAAAGCGTAATCTTCCAGGAATGCCAGATCCAGATGCAGAGGTGATTGCTCTGTCTCCGAAGACCCTATTGGCGACGAACAGATTCGTGTGCGAAATCTGCAACAAGGGTTTCCAGAGGGATCAGAACCTTCAGCTCCATCGAAGGGGTCACAACCTTCCATGGAAGCTGAGGCAGAGGTCGAGCAAGGAGGTGAAGAAGAGGGTGTATGTGTGCCCCGAGCCAACGTGCGTTCACCACGATCCTTCACGCGCGCTCGGGGATCTCACCGGAATCAAGAAGCACTTCTGCAGAAAGCACGGGGAGAAGAAGTGGAAATGCGACAAGTGCTCTAAGAAATACGCTGTTCAATCAGATTGGAAGGCTCACTCTAAGATTTGCGGCACTAGAGAGTACAAATGCGATTGTGGCACTTTGTTCTCAAGGAGGGATAGCTTCATCACGCATAGGGCTTTTTGTGATGCGTTGGCGGAGGAAAGTGCGAGATCTCAGACTCATTCACAAACTACTCAGTCTCAGATTGGTGTTAAGGTTAGTTCTGAATCAGATTCTAAGGCTGTTAACGCTGAATCTTCGTCGCCTCAGCCGACACCTCCACCTCCTGCTACTACTCCTGCTCCTGCTCCACCACCGCCGCCTCCTCCGGTTCAGCCGGAAGCTCCGCCACTGCCGGCCACTACTACTACTACCACCACCACCACCACCCAGCCAAACACTGTTGTTGTGCCACTGGTTTTGCAGACTCATAATCCAGAGTTGCCAGAAAATTCCCCACAAATCATAGAAGAGCCACAAGCTAACACTGCTCTGAATGGGAGCTGTAGCAGCAGCACTAGCTCAACAAGCAATGGTGGTACTAGCAGCAGTGTATTTGCAAGTTTGTTCGCTTCATCAACTGCATCGGGAGGGCAGGAGCGCCGCCAATATGCACCACCGCCACAGCCAACCATGTCTGCCACTGCTTTGCTGCAAAAAGCAGCTCAAATGGGTGCGGCTGCAACCAATGCCTCGCTGCTTCGTGGTTTAGGTATAGTGTCCTCTTCTGCTTCGTCTTCACCAGCTCAGCAAGATGGCTTGCAATGGGGTCAGCAGCCGGCTGAACCAGAGAGTGCCTCGGTTCCGGCGGGGCTTGGACTTGGGCTGTCTTTTGACAGTGGCTCTGGACTAAAGGAATTAATGATGGGGACTCCTTCCATGTTTGGTCCAAAGCATACCACCCTCGATTTTCTAGGATTGGGGATGGCTGCTGGGGGAACTCCTGGTGGAGGCTTGTCGGCACTCATCACATCTATTGGTGGTGGTTTGGATGTTAGTGCTGCAGCAGCAGCATCTTTTGGAAACGGAGAGTTTTCTGGCAAAGACATTGGGCGGAGCACATGA 1476 0.5183 MPVDLDNVSTASGEASVSSSGNQTVPSKSATKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARSQTHSQTTQSQIGVKVSSESDSKAVNAESSSPQPTPPPPATTPAPAPPPPPPPVQPEAPPLPATTTTTTTTTTQPNTVVVPLVLQTHNPELPENSPQIIEEPQANTALNGSCSSSTSSTSNGGTSSSVFASLFASSTASGGQERRQYAPPPQPTMSATALLQKAAQMGAAATNASLLRGLGIVSSSASSSPAQQDGLQWGQQPAEPESASVPAGLGLGLSFDSGSGLKELMMGTPSMFGPKHTTLDFLGLGMAAGGTPGGGLSALITSIGGGLDVSAAAAASFGNGEFSGKDIGRST* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0749 491 MobiDBLite consensus disorder prediction 191 270 - -
Ahy5g0749 491 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 340 490 - -
Ahy5g0749 491 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 7 326 - -
Ahy5g0749 491 MobiDBLite consensus disorder prediction 255 270 - -
Ahy5g0749 491 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Ahy5g0749 491 Gene3D Classic Zinc Finger 115 198 - -
Ahy5g0749 491 MobiDBLite consensus disorder prediction 192 224 - -
Ahy5g0749 491 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 7 326 - -
Ahy5g0749 491 MobiDBLite consensus disorder prediction 9 31 - -
Ahy5g0749 491 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Ahy5g0749 491 MobiDBLite consensus disorder prediction 379 399 - -
Ahy5g0749 491 SMART c2h2final6 102 132 IPR013087 -
Ahy5g0749 491 SMART c2h2final6 61 83 IPR013087 -
Ahy5g0749 491 SMART c2h2final6 137 157 IPR013087 -
Ahy5g0749 491 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Ahy5g0749 491 MobiDBLite consensus disorder prediction 379 405 - -
Ahy5g0749 491 MobiDBLite consensus disorder prediction 225 254 - -
Ahy5g0749 491 Gene3D Classic Zinc Finger 41 107 - -
Ahy5g0749 491 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 340 490 - -
Ahy5g0749 491 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0749 Ahy-Chr5 10059785 10063675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0749 1 491 IDZ Gene Family AT5G66730 57.011 3.70e-178 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy5g0749 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0749 K25869 - gmx:100806404 669.463