Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0746 ATGAGAGTTAACAATAACACGACATCAAACCCGAAACCCGTAGAAAGCACAATCGGCCTCGAGCCCACATCGGTGCTGGACCTGTGTAGAAGTCCCACCCCTGAGAAGGCAGTGGCTGCGCTGGTGGCTACTGCACCCAACACACAGCAAGAGTGTCTTGACCAGCTGGAGGACCATGTGCTTCACAATCTTGATTGGGACTCCATCATGAAGGACCTTGGATTCCATGAAGACTCCAACCCACCCTTGTTCAAGACCACCCTCCCTAATGTCCCTGACTTCTCTCCTTCCTTCGACCCACACTCCGAATTTCCAGACATCCAAACCATGTCCTACAACTACGCCAACGCCACTGCCACCCTCGACCACCTCCTCCATGACACCTCCAATAATTCTGCCGCCACCGGCTTCGATTTCATAGAAGAGCTCATCCGTGCTGCCGATTGCTTCGACACCAACCACCTCCACGTCGCTCACGTCATATTGGAGCGACTCAATCAACGCCTCCGATCCCCTGCGGGTGCAAAGCCTCTCCAACGCGCCGCCTTCTACTTCAAGGAAGCTCTCCAGGGCCTCCTCTCCGGTTCCAATCGCACTCCGCGTTTCTCCTCCCTCGTTGAGATCGTCCACTGCGTCAGAACATTCAAGGCCTTCTCTGGAATCTCGCCGATCCCTATGTTCTCCATCTTCACCACCAACCAGGCGCTCCTTGAGGCTTTTCATGGCTCCTCCTTCATGCACGTCCTTGATTTTGATATCGGATTAGGGATCCAGTATGCTTCGCTCATGAAGGAGATTGCAGAAAAGGCGGATTCCTTGAAACACGGATCGCCGCTTCTGCGCATCACCGCCGTGGTTCCCGAAGAGTACGCCGTCGAGAGCAAACTGATTCGGGAGAATCTCAGCCAGTTCGCGCACGAGCTCAGGATCCGCGTCCAGGTCGAGTTTGTGCCCCTCTGCAACTTCGAGACGCTGTCTTTTAAGGCGGTGAAGTTCGTCGATGGCGAGAAAACCGCCGTTCTTCTCTCGCCGGCGATATTCCGACGGCTCGGTTCCGCTGGGAGCACCGCGGCCTTCCTGGCGGACGTTCGGAGGGTTTCGCCGAGCGTGGTGGTGTTCGTGGACGGGGAGGGGTGGACGGAAGCTGCGGCAGCGGCGTCGTTCCGGCGCGGCGTGGTGAGCAGCCTAGAGTTCTACTCGATGATGCTGGAGTCGCTGGACGCGTCGATGGTTGCGGGAGGGGAGTGGGTGAGGAGGATCGAGATGCTTCTGCTGCGCCCGAAGATACTAGCGGCGGTGGAGGGAGCGGGGCGGAGGGTTCCGCCGTGGAGAGAGGCTTTCTATGGTGCCGGAATGAGGCCGGTGCAGTTAAGCCAGTTCGCAGATTTTCAGGCGGAGTGCTTGCTGGCTAAGGTGCAAATCAGGGGCTTCCACGTGGCAAAACGCCAAGCTGAGCTTGTGCTCTTCTGGCACGAGAGGGCCATGGTTGCCACGTCAGCTTGGCGATGTTAG 1512 0.5767 MRVNNNTTSNPKPVESTIGLEPTSVLDLCRSPTPEKAVAALVATAPNTQQECLDQLEDHVLHNLDWDSIMKDLGFHEDSNPPLFKTTLPNVPDFSPSFDPHSEFPDIQTMSYNYANATATLDHLLHDTSNNSAATGFDFIEELIRAADCFDTNHLHVAHVILERLNQRLRSPAGAKPLQRAAFYFKEALQGLLSGSNRTPRFSSLVEIVHCVRTFKAFSGISPIPMFSIFTTNQALLEAFHGSSFMHVLDFDIGLGIQYASLMKEIAEKADSLKHGSPLLRITAVVPEEYAVESKLIRENLSQFAHELRIRVQVEFVPLCNFETLSFKAVKFVDGEKTAVLLSPAIFRRLGSAGSTAAFLADVRRVSPSVVVFVDGEGWTEAAAAASFRRGVVSSLEFYSMMLESLDASMVAGGEWVRRIEMLLLRPKILAAVEGAGRRVPPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0746 503 PANTHER SCARECROW-LIKE PROTEIN 15 15 502 - -
Ahy5g0746 503 Pfam GRAS domain family 140 502 IPR005202 -
Ahy5g0746 503 ProSiteProfiles GRAS family profile. 130 502 IPR005202 -
Ahy5g0746 503 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 502 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0746 Ahy-Chr5 10021278 10023318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0746 56 502 GRAS Transcription Factor Family AT4G36710 54.968 7.40e-164 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy5g0746 GRAS 3.80E-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0746 - - aip:107640116 941.028