Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0685 ATGTCATTTTCCTTGTTTTCAACGCCGCAGCAACAGCAATCGCCTTTCCAGCAGAGTAGCTTGTTTCAGCAGCCGCAACAGCAACAGCAGCAGCTCCAACTTCAATTTCAGCAGCAGCAGCAACAACAACAACTACAACTGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGTTGTTTCTGTTCACCAATGATAAAACTCCTGCTACTTACAGTACCAACTGGTCCGATCTACACCCTGATTCCCAGAAGTTTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATCGGGACGAAAGCCAGAGGCTTGATCAATGTAGTCGTCTTTATGATTCTTCTGTTTCCAATGATGGGTTTGAGCTTGATGCAAGCCACATTGTTCAGGAACTTGGTGGAATCAGCACTGGTATGGAAAGACAGAAAACTGTGCTGCTGGAATTGATGTCTGTTGTCAAGGATATGTTACGCAACACTGAGGTAGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTTCTTCATCCCAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACTGCTGGTGCAACTGCATCATCTGGTCCAAGTAGCCAACCAACTGCTACATCTATAGTGCCTGTTTTTGACTTTTATAGTGGTCTTCCAAAGAAACCGTCACCCTTTTTACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGTGAATGTCATCAGTGGATTGAAGAATTGGAGCAGCTTATTCTTTTGGACTCTGAGAGAAATGGTTCCTCTAATGGATCCTCGTTGTTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGATTTTTTTGTTCATGTGGCTGCAAAGGTCGAGAGCATTCATCAATATATTGAATCTATGAAATCAGCATACCTAGCTGATCAACGCCGACGGGGGGAGGTGAATGATCCATTTTTAGAGGCTGACCGGCGAGAAACTGCAAGACAAGAAGCCGCCTCGAAAAGAGTTCATCCGACGTTGCATTTACCTGCAAATTCACAGCCCTCAACTCAAGTTGCAGGGTTGTTTTCTAGTTCAGGAACTCAAGGAGCATTGGCTGCCCCACAGACATCCACAGCAACTACATCCTCATCAGGAAGTGGACTCTCTCTTTTTAGTACACCTTCTTCTGCTCCATCATCTTCTATGTCATTGTCTTTGTTTGCAACCCCATCAACTCCTGCCCTAGGGTCTTCTTGGTTTGGATCATCTACTGCTACACCTCAAACCTCACTTTTTGGTTCTACATCATCCTCCTTACCTGGTCCTGCTTCAACTCCTTCTTTGTTTAGTAATACTGCTCCCTTGTTTAGTTCAACTCCAGCTGGAAATTCGCTCTTCTCAAGTTCATTTGTGTCAGGTGCTGCAACAGGATCCGGTGCGAGCTTTGGAGGATCTAAAAATCCGCGGCCAAAATCCCGAACTGCTCGACGCTAA 1464 0.457 MSFSLFSTPQQQQSPFQQSSLFQQPQQQQQQLQLQFQQQQQQQQLQLQQQQQQQQQQQLFLFTNDKTPATYSTNWSDLHPDSQKFLLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDASHIVQELGGISTGMERQKTVLLELMSVVKDMLRNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTAGATASSGPSSQPTATSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWIEELEQLILLDSERNGSSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALAAPQTSTATTSSSGSGLSLFSTPSSAPSSSMSLSLFATPSTPALGSSWFGSSTATPQTSLFGSTSSSLPGPASTPSLFSNTAPLFSSTPAGNSLFSSSFVSGAATGSGASFGGSKNPRPKSRTARR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0685 487 MobiDBLite consensus disorder prediction 312 331 - -
Ahy5g0685 487 MobiDBLite consensus disorder prediction 336 382 - -
Ahy5g0685 487 MobiDBLite consensus disorder prediction 1 20 - -
Ahy5g0685 487 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 484 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Ahy5g0685 487 PANTHER NUCLEOPORIN P58/P45 6 484 - -
Ahy5g0685 487 MobiDBLite consensus disorder prediction 466 487 - -
Ahy5g0685 487 MobiDBLite consensus disorder prediction 312 382 - -
Ahy5g0685 487 MobiDBLite consensus disorder prediction 176 201 - -
Ahy5g0685 487 MobiDBLite consensus disorder prediction 179 201 - -
Ahy5g0685 487 Coils Coil 37 58 - -
Ahy5g0685 487 Gene3D - 219 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0685 Ahy-Chr5 9038597 9043416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0685 59 487 NAC Transcription Factor Family AT4G37130 65.227 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0685 K14307 - gmx:100776992 593.578