Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0678 ATGGAGCTGAGCTTGGATTTGAGTTTGTCCTTTGTCCCAAAGACCATATCAATGTTCTTGGGCGATGTTTCTCGGAGCACACAAATCTCTGACAAATTGGCCATGCTTGATGATTTCCTCAACCGATTGGAGGATGAGATGACTAAGATCCACGCCTTCAAACCTATAACAAGATTGAAGGAAGAAAAGCTTCGCTGTATGGGAATGCAAGATCCACAACCTCTCACCACTCAAGAACCACATCATAATAATAACAACTGGATGACTTCACTTCAGCTATGGAGCACTCAAACCAAATCGAGGTGTGAAGAAGATTGTTCTGTGCCAGAGAACCCAATCAAGAGAAGGGAGAACAAGAACAGAAGTGGAGGAGGAGGAGGAGTTGCATTGTTGAATGGGAACTCAAAGGAGGTTTCGAAAGTTCCTAGCTTTAGTTTGATGACTACTACTCCAGCACCTGAACTGAAAAGTAGCAGTTCCAAGAGTAATTCTTCTTCTCTGTTCATGAATCGTGTTGAGATTCAAGCCCAGCAATCTCAGAATCCTAGGAAACAAAGGCGATGCTGGTCACCGGAGCTTCACCGGCGTTTCGTCAATGCTCTCCAACAACTTGGAGGAGCACAAGTGGCCACTCCTAAGCAGATAAGGGAACTGATGCAGGTGGAAAGCCTAACAAACGATGAAGTCAAAAGTCACTTACAAAAGTACAGACTTCATGTTAGAAAATTCCCAGTTTCATCTTCAGCTGAGCATGATGCTAATAATAATAATATTGATGATGATGATGAGGATGATCTATGGGAAATGAAGAAGAAAGATCAATGTGGAAAAGGGAACAAAAATTCATCATCACAATCACAATCTGGTTCACCACAGGGTCCTCTACTCTTAGCAGGTTCAGTTAAGGGACTCTCAAGCATGGATGCAGATGATGAGCACTCAGATTGCCGCAATTGGAAAGCTGCTATTCACCACCAACCGCCAGAATCTGATAATCACAGCCGCTAA 1008 0.4335 MELSLDLSLSFVPKTISMFLGDVSRSTQISDKLAMLDDFLNRLEDEMTKIHAFKPITRLKEEKLRCMGMQDPQPLTTQEPHHNNNNWMTSLQLWSTQTKSRCEEDCSVPENPIKRRENKNRSGGGGGVALLNGNSKEVSKVPSFSLMTTTPAPELKSSSSKSNSSSLFMNRVEIQAQQSQNPRKQRRCWSPELHRRFVNALQQLGGAQVATPKQIRELMQVESLTNDEVKSHLQKYRLHVRKFPVSSSAEHDANNNNIDDDDEDDLWEMKKKDQCGKGNKNSSSQSQSGSPQGPLLLAGSVKGLSSMDADDEHSDCRNWKAAIHHQPPESDNHSR* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0678 335 SUPERFAMILY Homeodomain-like 182 242 IPR009057 -
Ahy5g0678 335 MobiDBLite consensus disorder prediction 105 134 - -
Ahy5g0678 335 MobiDBLite consensus disorder prediction 306 335 - -
Ahy5g0678 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 241 IPR017930 -
Ahy5g0678 335 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 324 - -
Ahy5g0678 335 Gene3D - 183 240 - -
Ahy5g0678 335 Pfam Myb-like DNA-binding domain 186 237 IPR001005 -
Ahy5g0678 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 324 IPR044787 GO:0003700|GO:0006355
Ahy5g0678 335 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 184 239 IPR006447 GO:0003677
Ahy5g0678 335 MobiDBLite consensus disorder prediction 272 335 - -
Ahy5g0678 335 MobiDBLite consensus disorder prediction 105 121 - -
Ahy5g0678 335 MobiDBLite consensus disorder prediction 278 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0678 Ahy-Chr5 8958542 8961015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0678 1 242 G2-like Transcription Factor Family AT2G03500 36.824 1.04e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy5g0678 Myb_DNA-binding 2.90E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0678 - - gmx:100785723 303.523