LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy5g0671	ATGGGTCTCTGCAATTCGAAACCCTACTCGAATCCCACCCGTTCTTCTCGAAATTTCGATCCTCATGGCAATTCTTCAACAGCTAATAATAATGATGGTGCTGGAGCTCATTCCAGCTCCGTTAATGGCGGAAACCCTAGCGCTGACGCACCCAACGACGGCGTTAAGAGATCCCCGTTCTTCCCATTCTACACTCCGAGTCCGGCACATTACTGGTTCTCCAAGAAGTCGCCGGCGGCGAGATCTCCGGCGACCTCCGACTCCACGCCCAGGCGGTTCTTCAAACGGCCGTTCCCGCCGCCATCTCCTGCGAAACACATAAGGGCGGTGCTCGCCCGGCGGCACGGTTCGGTGAAGCCTAACGAGGCCACCATACCGGAAGGTAGCGAGGCCGATGAGGTGGTTGCGCTGGATAAGAATTTCGGGTTTTCGAAGCATTTTGGAAACAAATTTGAGGTTGGAAGTGAAGTTGGAAGAGGGCATTTTGGGTACACCTGTGCTGCCAAGTTCAAAAAAGGGGAACTGAAGGGGCAGCAGGTGGCAGTGAAAGTCATCCCCAAAGCTAAGATGACTACTGCCATTGCAATTGAGGATGTCCGAAGAGAAGTAAAAATATTGAGAGCTCTAACTGGGCACAAGAATCTTGTACAGTTCTACGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAATTGTGTGAAGGAGGGGAGCTGTTAGACAGAATCCTATCAAGGGGTGGAAAATACACTGAGGAAGATGCAAAGGCTGTCTTGAGACAAATATTAAATGTTGTTGCGTTTTGCCACCTGCAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTTTTGTTCACATCTAAGGATGACAACTCGGAGCTAAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACCAGGTCATCCATGGATTAAAAGCAACAAGGATGTAAAAGTACCCCTGGATATTCTAATATTCAAGCTCATGAAAGCATATATGCGTTCCTCATCTCTACGAAAAGCAGCTTTAAGGGCACTGTCCAAGACGTTAACTGTAGACGAGCTATTTTATTTAAAGGAGCAGTTTACTCTTTTGGAGCCAAACAAAAATGGAACCATTAGCCTGGAGAACATCAAAGCAGCCTTGGTGAAAAATGCAACAGATGCTATGAAGGAGTCACGCATTCCTGACTTCCTTGGATCACTTAATGCATTGCAATATAGGAGGATGGATTTTGATGAGTTTTGTGCAGCTACACTTAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGAGCAACATGCACGGTGTGCCTATGAACTTTTTGAAAAGGATGGAAACAGGGCTATAGTCATTGAAGAGCTAGCTTCGGAGCTTGGCCTTGGCCCATCTGTCCCTGTTCATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGCAAGTTAAGCTTCCTTGGATTTGTGAAATTGCTGCATGGCCCATCTCGAAGTCTTGTAAAAGCTCAGTAG	1518	0.4664	MGLCNSKPYSNPTRSSRNFDPHGNSSTANNNDGAGAHSSSVNGGNPSADAPNDGVKRSPFFPFYTPSPAHYWFSKKSPAARSPATSDSTPRRFFKRPFPPPSPAKHIRAVLARRHGSVKPNEATIPEGSEADEVVALDKNFGFSKHFGNKFEVGSEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDDNSELKAIDFGLSDFVKPGHPWIKSNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELFYLKEQFTLLEPNKNGTISLENIKAALVKNATDAMKESRIPDFLGSLNALQYRRMDFDEFCAATLSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKAQ*	506

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy5g0671	505	MobiDBLite	consensus disorder prediction	1	47	-	-
	Ahy5g0671	505	Gene3D	-	339	493	-	-
	Ahy5g0671	505	SUPERFAMILY	EF-hand	342	496	IPR011992	-
	Ahy5g0671	505	Pfam	Protein kinase domain	151	312	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy5g0671	505	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	275	287	IPR008271	GO:0004672\|GO:0006468
	Ahy5g0671	505	PANTHER	SERINE/THREONINE-PROTEIN KINASE	57	308	-	-
	Ahy5g0671	505	Gene3D	-	332	423	-	-
	Ahy5g0671	505	PANTHER	CALMODULIN-DOMAIN KINASE CDPK PROTEIN	311	500	-	-
	Ahy5g0671	505	Gene3D	Transferase(Phosphotransferase) domain 1	144	323	-	-
	Ahy5g0671	505	PANTHER	SERINE/THREONINE-PROTEIN KINASE	311	500	-	-
	Ahy5g0671	505	SMART	serkin_6	151	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy5g0671	505	SUPERFAMILY	Protein kinase-like (PK-like)	148	311	IPR011009	-
	Ahy5g0671	505	PANTHER	CALMODULIN-DOMAIN KINASE CDPK PROTEIN	57	308	-	-
	Ahy5g0671	505	ProSiteProfiles	EF-hand calcium-binding domain profile.	356	391	IPR002048	GO:0005509
	Ahy5g0671	505	ProSiteProfiles	Protein kinase domain profile.	151	478	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy5g0671	505	MobiDBLite	consensus disorder prediction	74	100	-	-
	Ahy5g0671	505	ProSitePatterns	Protein kinases ATP-binding region signature.	157	183	IPR017441	GO:0005524
	Ahy5g0671	505	MobiDBLite	consensus disorder prediction	1	54	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy5g0671	Ahy-Chr5	8814101	8818851	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy5g0671	311	505	EF-hand Containing Proteins	AT3G50530	84.103	2.59e-114	349

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CDPK	Ahy5g0671		Pkinase	5.20E-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy5g0671	K00924		-	cpap:110808395	549.666