Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0615 ATGGAGGGTGAAGGAGGTGAGAGAGGGACGAGGAAGAGAGTGGCGGAGAGTGGTGGCGGAGAGAGAAGGTATAAAGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTCGATGAGATTAGAGAACCAAACAAGCGTTCAAGGATTTGGCTCGGTTCATACTCAACCCCTATCGCCGCCGCAAGAGCCTACGACACCGCCGTCTTCTACCTCCGAGGACCCTCCGCCCGCCTCAACTTCCCCGAGCTTCTCGCCGGAGAACCCCCTCCTTCCCTTGTCGGCGCCTGCGACATGTCCGCCGCTTCCATAAGGAAGAAAGCCACCGAGGTCGGCGCCAGAGTCGATGCCCTCCAGGCCGCCACTCTTCACCACCACCACTTAGCTGCGCCGCCGCAGGAGCTTATATCGGGGCGGTCCGGAGATTTTGCGGAGCGGGTTGATTTGAACAAGATACCAGAACCCGAAGATTGTGAATGGGAGATGAATTAA 486 0.5802 MEGEGGERGTRKRVAESGGGERRYKGIRMRKWGKWVDEIREPNKRSRIWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPELLAGEPPPSLVGACDMSAASIRKKATEVGARVDALQAATLHHHHLAAPPQELISGRSGDFAERVDLNKIPEPEDCEWEMN* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0615 161 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Ahy5g0615 161 PRINTS Ethylene responsive element binding protein signature 62 82 IPR001471 GO:0003700|GO:0006355
Ahy5g0615 161 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Ahy5g0615 161 MobiDBLite consensus disorder prediction 1 20 - -
Ahy5g0615 161 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Ahy5g0615 161 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 6 155 - -
Ahy5g0615 161 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Ahy5g0615 161 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Ahy5g0615 161 CDD AP2 23 82 IPR001471 GO:0003700|GO:0006355
Ahy5g0615 161 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 6 155 - -
Ahy5g0615 161 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0615 Ahy-Chr5 7823605 7824645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0615 9 159 AP2-EREBP Transcription Factor Family AT5G67190 56.044 2.35e-54 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy5g0615 AP2 8.50E-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0615 K09286 - gmx:100783682 231.876