Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0575 ATGAGTGATCAAGATGATTATGAGGTTGTGCGGAAAGTGGGAAGGGGGAAATATAGCGAGGTTTTTGAAGGCATAAATGTTAATAGCAATGAGCGCTGTATAATCAAGATTCTCAAGCCTGTCAAGAAAAAAAAGATTAAAAGGGAGATTAAAATACTTCAGAACCTCTGTGGAGGCCCTAATATTGTCAAACTTCTTGATATTGTCAGAGATCAACATTCGAAAACTCCTAGCTTGATATTTGAGTATGTCAACAGTACAGATTTTAAAGTTTTGTATCCAACCTTGACTGATTATGACATACGCTATTACATATATGAGCTCCTCAAGGCATTGGATTACTGCCACTCTCAAGGCATAATGCATAGAGATGTCAAGCCTCATAATGTTATGATTGATCATGAATTAAGAAAACTTCGCTTAATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATATAATGTTCGTGTGGCTTCAAGATACTTCAAGGGGCCTGAACTTCTAGTTGATTTGCAAGACTATGACTATTCATTAGATATGTGGAGCCTTGGCTGCATGTTTGCTGGAATGATATTTCGCAAGGAGCCTTTCTTCTATGGTCATGACAACCATGATCAGCTTGTCAAAATAGCTAAGGTGCTTGGGACTGATGAACTGAATGCGTATCTGAATAAGTATCATCTAGAGCTTGATCCTCAACTTGATGCTCTTGTTGGAAGACACAGTCGCAAACCATGGTCTAAGTTTATCAATGCAGATAATCAGCATCTTGTGTCTCCAGAGGCAATTGATTTTCTTGATAAGCTCCTTCGGTATGATCACCAAGACAGGCTAACAGCCAGAGAAGCAATGGCACATCCATATTTCTCTCAAGTTAGGGCTGCAGAAAGTAGCAGAATGAGGACACAGTAA 921 0.3909 MSDQDDYEVVRKVGRGKYSEVFEGINVNSNERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRMRTQ* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0575 306 Pfam Protein kinase domain 7 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0575 306 ProSitePatterns Protein kinases ATP-binding region signature. 13 36 IPR017441 GO:0005524
Ahy5g0575 306 PANTHER CASEIN KINASE II SUBUNIT ALPHA 2 306 IPR045216 GO:0004674|GO:0006468
Ahy5g0575 306 ProSiteProfiles Protein kinase domain profile. 7 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0575 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Ahy5g0575 306 Gene3D Transferase(Phosphotransferase) domain 1 84 293 - -
Ahy5g0575 306 SMART serkin_6 7 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0575 306 Gene3D Phosphorylase Kinase; domain 1 60 83 - -
Ahy5g0575 306 Gene3D Phosphorylase Kinase; domain 1 3 56 - -
Ahy5g0575 306 PANTHER CASEIN KINASE II SUBUNIT ALPHA-3 2 306 - -
Ahy5g0575 306 SUPERFAMILY Protein kinase-like (PK-like) 4 296 IPR011009 -
Ahy5g0575 306 CDD STKc_CK2_alpha 2 292 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0575 Ahy-Chr5 7300509 7305140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0575 1 292 Core Cell Cycle Gene Families AT1G76540 29.393 1.82e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Ahy5g0575 Pkinase 4.90E-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0575 K03097 - gmx:100819679 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0575 5 7300509 7305140 Ahy11g1140 11 33637571 33642080 PCT
Ahy5g0575 5 7300509 7305140 Ahy1g1038 1 19466790 19471332 PCT
Ahy11g1140 11 33637571 33642080 Ahy5g0575 5 7300509 7305140 PCT
Ahy1g1038 1 19466790 19471332 Ahy5g0575 5 7300509 7305140 PCT