Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0570 ATGCAATATACACTCACTACCTTCTCTAACTCTTCAATGACGCAATTCACCACAAAAATACCACCACCTTTGCATCCCTACAACTTTTCATTTTCAAACCCTAATAATAATAATATTATGAACAAGAACCAACAAATTCCTAGGACTAGGCCCTGGCCTGCTTTCCCTACACCTAAGTCACTACCTACTTCCACCACCTTCGGTGACGCCACTTGCATGGAACAGTTACTTGTTCACTGCGCCAACGCTATTGAAACCAACGACGTAACCCTCGCTCAGCAGATTCTCTGGGTTCTAAACAACATAGCTCCACCTGACGGCGATTCCAATCAGCGACTCGCCGGAAGCTTCCTCAGAGCCCTAACCGCACGCGCCGCGAATACTGGAAGCTGCAAGATGCTCGCCGCTGTAGCTGACGCCGCTGCTAACCGTAACAGCCTCGCCATCGAAACGCACAGATTCTCTGTCATCGAGCTGGCAAACTTCGTTGACCTCACTCCATGGCACAGGTTCGGGTTCACCGCCGCCAACGCCGCCATTTTAGAAGCCACGGAAGGGTTCTCGGTGATCCACATCGTGGATTTGAGCTTGACGCACTGCATGCAGATCCCGACGCTGATCGACGCCATCGCTGGCCGCCACGAGGTGCCTCCTGTAATCAAGCTCACGGTTCCCGGTGCCGCCTTCAGAGAAGGTAACATCAATATCCCTCCAATACTCGATCTTTCTTACGAGGAATTAGGCGCGAAGTTGGTCAACTTCGCTAGGTCGAAGAACGTGGTCATGGAATTCAGCGTTGTATCTTCGAGTTACGCTGATGGATTCGCCTCTTTGATCGAACACCTGAGAGTGCAACATATAGTTTCCGTTGCAGAAGGTCATCGTCCAAACGAAGCTTTGGTTATTAACTGTCACATGATGCTTCATTACATTCCCGATGAAACTGCACTAGTTCATCATCATCATGAAACAGATTCGAATTTAAACCCTTTTATTGTTCATGATTACTCTTCTTCTTCGTCATCTCCTTCATCTTCATCGTCGTCATTGCGGTCAATGTTTCTTAAGGCGGTTCGGAGTTTGGAACCTACAATTATGGTTTTGGTAGATGAGGACGTGGATTTGATATCAAATAACTTGGTGTGTAGGCTAAGGTCTGCGTTCAATTATCTGTGGATACCGTACGACACGGTGGACACGTTCCTTCCTCGAGGCAGCAAGCAAAGGCAGTGGTATGAAGCTGACATATGTTGGAAGATTGAGAACGTGATAGCGCATGAAGGGGCTGAGAGGGTGGAGAGGGTTGAGCCCAAGAGCAAGTGGGAGCAAAGGATGAGAAATGCGAGCTTCCATGGGATTGGATTCAGTGAGGAATCGATTTCTGAGGTGAAGGGGATGCTGGATGAACATGCTGCTGGTTGGGGTGTTAAGAAGGAAGATGACAATCTTCTTCTCACCTGGAAAGGCCATAATGTTATCTTTGCTTCAGCTTGGTTACCTGCTTAG 1506 0.4827 MQYTLTTFSNSSMTQFTTKIPPPLHPYNFSFSNPNNNNIMNKNQQIPRTRPWPAFPTPKSLPTSTTFGDATCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLAGSFLRALTARAANTGSCKMLAAVADAAANRNSLAIETHRFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIAGRHEVPPVIKLTVPGAAFREGNINIPPILDLSYEELGAKLVNFARSKNVVMEFSVVSSSYADGFASLIEHLRVQHIVSVAEGHRPNEALVINCHMMLHYIPDETALVHHHHETDSNLNPFIVHDYSSSSSSPSSSSSSLRSMFLKAVRSLEPTIMVLVDEDVDLISNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGAERVERVEPKSKWEQRMRNASFHGIGFSEESISEVKGMLDEHAAGWGVKKEDDNLLLTWKGHNVIFASAWLPA* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0570 501 Pfam GRAS domain family 73 498 IPR005202 -
Ahy5g0570 501 PANTHER SCARECROW-LIKE PROTEIN 32 45 499 - -
Ahy5g0570 501 ProSiteProfiles GRAS family profile. 64 499 IPR005202 -
Ahy5g0570 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 499 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0570 Ahy-Chr5 7198503 7200699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0570 40 500 GRAS Transcription Factor Family AT3G49950 54.741 7.19e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy5g0570 GRAS 8.50E-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0570 - - adu:107487668 935.636