Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0569 ATGAGTTGCAACGGGTGCCGAGTCCTTAGGAAGGGTTGCAGCGAGTCATGCATCTTAAGGCCATGCCTTCAGTGGATCGAAACCGCCGAGGCCCAAGGCCACGCCACCGTCTTCGTGGCCAAATTCTTTGGTCGCGCCGGCCTCATGTCCTTCATTTCCAATGTCCCTGAGCCCCAAAGACCTGCTCTTTTTCAGTCTTTACTTTTCGAAGCATGTGGACGAACGGTTAACCCGGTTAACGGTGCCGTTGGACTACTGTGGACTGGAAACTGGCACGTGTGCCAGGCCGCCGTTGAAACGGTGCTTCGAGGAGGCTCCCTCAGGCCTATGCCGGAGCTACTCGGTCTCGACGCGCCTGTTCCTGTCGCTGTTGACGCCGGCTCCGAGGGGGAAGTCACGTGCGCTGACGCGCGGAAGCTCCGAGATCCGAACCCGAGTCCGAACATAAGGTTCACGAGCTCCCGATCTGGTAAAGATAGTTCCGGCGGGAAACGGAAGCGATCGGAGGAGTTGATGATGACGACGGCGGACCTTAACCTTCGGCTGACGCCGAGTGCCGTGCATAGCGGTTGCCGGCAGGAAATTCGGCGGCCGGGAACGCCGTCGATGAATTCGGAGGAATCGGTGACGACGATGGCGTGCTTGGAGAGCGGACTCGGAGATAACTACGCTCACGGCGGAGACCGGAAAGTCCTCAACCTTTTCATCTGA 711 0.5879 MSCNGCRVLRKGCSESCILRPCLQWIETAEAQGHATVFVAKFFGRAGLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGSLRPMPELLGLDAPVPVAVDAGSEGEVTCADARKLRDPNPSPNIRFTSSRSGKDSSGGKRKRSEELMMTTADLNLRLTPSAVHSGCRQEIRRPGTPSMNSEESVTTMACLESGLGDNYAHGGDRKVLNLFI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0569 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 236 - -
Ahy5g0569 236 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Ahy5g0569 236 MobiDBLite consensus disorder prediction 138 170 - -
Ahy5g0569 236 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Ahy5g0569 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0569 Ahy-Chr5 7152919 7154331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0569 1 236 AS2 family AT4G37540 58.964 2.09e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy5g0569 LOB 2.90E-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0569 5 7152919 7154331 Ahy19g3330 19 156313470 156314255 PCT
Ahy5g0569 5 7152919 7154331 Ahy9g2308 9 111956678 111957387 PCT
Ahy11g1131 11 33018008 33019404 Ahy5g0569 5 7152919 7154331 PCT
Ahy1g1056 1 20123570 20125011 Ahy5g0569 5 7152919 7154331 PCT