Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0566 ATGGCCATAAGGCCCTTCCAATTCCAATCTTCCACCTTCTCCCGCGATACTTTCCTTTCTCTTTTCCGCACTTACCACCATCTTCATCTTCCTTCTTCTTCTTCCTCCTCTTTCCCCACTCTCCCCTCCATTCTCCTCCTCCGCAGCTTCGCCGCCTCCGCGCCATCTTCATTCTCTCGCCGCAACCGCTCTCATCCTCCTCCTCCTCCACCACCACCACCTGACACCCTGGCGCAGAAGATTGGAAAGTCCACTCGCCGCCCCAGCGCCACCTCCAAGGCCAGGATTTATGCCGATATCAACGTCGTCCGTCCCAAGGAATATTGGGACTATGAAAATCTCACCGTCCAGTGGGGGGAGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTCTTCGAGGGCGTTCACTCCACCAATAATGAAAAATGCATCATCAAGATCCTCAAACCCGTCAAGAAGAAAAAGATAAAGAGGGAGATCAAAATATTGCAAAATCTTTGTGGAGGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCCACCCCACCCTGTCAGATTATGATATCCGATATTATATCTATGAACTTCTAAAGGCACTGGATTATTGCCACTCTCAAGGAATCATGCATCGGGATGTAAAGCCGCATAATGTAATGATTGATCATGAGCAGCGGAAGCTTCGCCTAATAGATTGGGGGCTTGCAGAGTTTTATCATCCTGGGAAAGAATATAATGTCCGCGTTGCCTCCAGATATTTCAAAGGTCCTGAACTTCTTGTTGATCTTCAGGACTATGATTACTCTCTTGATTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATTTTTCGTAAGGAGCCATTCTTTTACGGACATGATAACTATGATCAACTAGCCAAAATAGTTAAGGTACTTGGAACTGATGAATTAAATGCGTATCTGAACAAGTACTGCATAGAGTTGGACCCAAATCTAGCAGCACTTGTTGGGAGGTATGCTCGAAAGCCATGGTCAAAGTTTATTAGTGTAGAAAACCAACACTTGGCAGTTCCTGAGGCTATTGACTTTGTTGACAAGTTACTGCGGTATGATCACCAAGATCGACCCACTGCAAAAGAAGCCATGGCCCACCCTTACTTCAATCCAGTTAGAAATGCTGAAAGCAGCAGAACTCATACACATTGA 1272 0.4536 MAIRPFQFQSSTFSRDTFLSLFRTYHHLHLPSSSSSSFPTLPSILLLRSFAASAPSSFSRRNRSHPPPPPPPPPDTLAQKIGKSTRRPSATSKARIYADINVVRPKEYWDYENLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHSTNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLHPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLAKIVKVLGTDELNAYLNKYCIELDPNLAALVGRYARKPWSKFISVENQHLAVPEAIDFVDKLLRYDHQDRPTAKEAMAHPYFNPVRNAESSRTHTH* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0566 423 PANTHER CASEIN KINASE II SUBUNIT ALPHA 75 415 IPR045216 GO:0004674|GO:0006468
Ahy5g0566 423 SUPERFAMILY Protein kinase-like (PK-like) 96 413 IPR011009 -
Ahy5g0566 423 Gene3D Transferase(Phosphotransferase) domain 1 201 409 - -
Ahy5g0566 423 ProSiteProfiles Protein kinase domain profile. 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0566 423 PANTHER BNAA04G13490D PROTEIN 75 415 - -
Ahy5g0566 423 MobiDBLite consensus disorder prediction 57 90 - -
Ahy5g0566 423 CDD STKc_CK2_alpha 105 409 IPR045216 GO:0004674|GO:0006468
Ahy5g0566 423 Gene3D Phosphorylase Kinase; domain 1 124 200 - -
Ahy5g0566 423 Pfam Protein kinase domain 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0566 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Ahy5g0566 423 MobiDBLite consensus disorder prediction 62 77 - -
Ahy5g0566 423 SMART serkin_6 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0566 423 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0566 Ahy-Chr5 7067521 7071875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0566 122 410 Core Cell Cycle Gene Families AT1G76540 30.696 2.86e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Ahy5g0566 Pkinase 9.60E-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0566 K03097 - gmx:100776388 656.751