Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0560 ATGGCTAGTGTGGACCACAATTGTTGTAATTCTCTCCAAGATGACAACAAATTCACTCCAGCACCGCCACTGCCACCACCACCACCACCACCTCCTCTGCCCCGTTCAGCAGCAACTAGTTGTTGTCCTTGCAGGCGCCTTGTGGCGAATTATAATTCAGCGATGAGAGAGCGCAGCTATGTATCTCCAGCAACAATAGAATTGTGGGATCGTCTTTTTGATTCAGGATTTAAAGCAGATGTTAGGATTAATACTGGTAACGGCGGCATTGTTTACGCTCATTATAACATAGTTGCAGTGGCATCCCCCGTATTAAGAGGCTTGCTGAAGCAAGGAAATTTTTTTCGGAGGTGGAGATCAATCACAATCAAAGGGGTACCACATGATGCTGTTCGGGTTTTCTTTCGATATTTGTACACTTCGTGTTATGAGAAGGAAGAGATGGAAGCATATGTACTACATTTGTTAGTGCTGTCACATGTATTCATGGTTCCTCATTTGAAGCGGGAATGTGAGCAGAATCTAGAATCGAGTTTCCTCACAATAGACAATGTAATTGATGTATTTCAGATTTCATTACTGTGTGATGCTCCACGGCTTAGCCTCATCTGTCACCGTATGATACTTAGCAACTTCAAAGCAGTTTCAGAGTCTGAAGGATGGAAAGCGATGAAGGAGAGCCATCCAGTTTTAGAAAAGGAAGTTTTGGAGTCCATGATCGAGGAAGAAAATAATAAAAAGGAGAGGACCCGAAAGATCAATGAGAGGAAGATATACATGCAACTGTATGAGGCGATGGAAGCTCTTGTTCACATATGCAGAGATGGCTGCCGAACTATTGGCCCTTGTGATAAAGACTTTAAAGCAAATCAGCCATGTAAATATGCAGCATGTAAGGGGCTAGAATTGCTCGTGCGACATTTTGCTGCATGCAAACTTAGAGTCCCTGGAGGTTGTGGTCATTGCAAGAGGATGTGGCAACTATTAGAGCTGCATTCCCGAATATGTTCTGATCCCGATGGTTGTAGAGTTCCCTTGTGCAGGAACTTTAAGCAGCGGATATCGAAACAAAGCAAGAAAGAGGAAATCAGGTGGAAAATATTGGTTAAAAAGATCTTGAGAACAAGAGGTATTGGAATAGCACCATGCTTTCAGCAGCAATAA 1164 0.4304 MASVDHNCCNSLQDDNKFTPAPPLPPPPPPPPLPRSAATSCCPCRRLVANYNSAMRERSYVSPATIELWDRLFDSGFKADVRINTGNGGIVYAHYNIVAVASPVLRGLLKQGNFFRRWRSITIKGVPHDAVRVFFRYLYTSCYEKEEMEAYVLHLLVLSHVFMVPHLKRECEQNLESSFLTIDNVIDVFQISLLCDAPRLSLICHRMILSNFKAVSESEGWKAMKESHPVLEKEVLESMIEEENNKKERTRKINERKIYMQLYEAMEALVHICRDGCRTIGPCDKDFKANQPCKYAACKGLELLVRHFAACKLRVPGGCGHCKRMWQLLELHSRICSDPDGCRVPLCRNFKQRISKQSKKEEIRWKILVKKILRTRGIGIAPCFQQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0560 387 Gene3D TAZ domain 254 377 IPR035898 -
Ahy5g0560 387 SUPERFAMILY TAZ domain 256 356 IPR035898 -
Ahy5g0560 387 SMART TAZ_2 256 348 IPR000197 -
Ahy5g0560 387 Pfam BTB/POZ domain 71 177 IPR000210 GO:0005515
Ahy5g0560 387 Gene3D - 180 253 - -
Ahy5g0560 387 MobiDBLite consensus disorder prediction 19 35 - -
Ahy5g0560 387 MobiDBLite consensus disorder prediction 16 35 - -
Ahy5g0560 387 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 27 386 IPR044513 -
Ahy5g0560 387 SUPERFAMILY POZ domain 61 177 IPR011333 -
Ahy5g0560 387 Gene3D Potassium Channel Kv1.1; Chain A 50 179 IPR011333 -
Ahy5g0560 387 Coils Coil 233 253 - -
Ahy5g0560 387 ProSiteProfiles Zinc finger TAZ-type profile. 252 350 IPR000197 -
Ahy5g0560 387 SMART BTB_4 79 179 IPR000210 GO:0005515
Ahy5g0560 387 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 27 386 - -
Ahy5g0560 387 Pfam TAZ zinc finger 263 347 IPR000197 -
Ahy5g0560 387 ProSiteProfiles BTB domain profile. 79 147 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0560 Ahy-Chr5 6965121 6968373 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Ahy5g0560 BTB 1.40E-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0560 - - lja:Lj2g3v1968190.1 561.992