Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0558 ATGGGGAGCTCTCTCACTGCCACCTCTTTTTCTTTGTCAAGTCTAATGTGTGAAGAAGAAGGTGAAGCTTGCTTCTTTGAAGACAACTATGATGATGAAAATGAACACACTGGGATTGTTTTTCATGAGGAAGATGAAGAGGAATACATTGAGTATTTGTTCAGCCAAGAAACTGCTTTTGGATTCCACAATCATGATGATTGCTCCGCCGCCACATTCTGGTTGAGGACTGCTCGTTTTGATGCCATTGATTGGATTTTCAATACACAGGCCAAACTTGGATTCAAAGTTCACACAGCTTATTTATCAGTCTCCTACTTTGATCGGTTTCTTTCAAAACGATCCATTGATGAATCAAAACCTTGGGCTATTCAATTATTATCGGTGGCATGCTTATCTCTTGCAGCAAAAATGGAAGAGCAAAATGTGCCTCCACTCTCTGAATATTCAATAGTTGAATACAGATTTGAGAGCAAAGTGATTAAGAACATGGAGCTTCTGATTCTTGCTACCTTGGATTGGAAAATGGGATCATCATCACCAACTCCTTTTTCTTATCTCCATTACTTTCTCACAAAGTTCTGCCCTGGATCCAATTCACACACAATCATCACAAAAGCCACCCAACACATTGTAGCCATGGTCAAAGATGTTAATTTGATGGATCAACGGCCATCTATAATAGCCTCCGCTGCAATATTAGCAGCAGTTGATGCTACATTAACAAGAAAGACCATGGATCTTAGGATAAGAAAAATCTCATCTTGGGGCAATCTAGAAAGTGGAGATGTATTTTCCTGTTATAATCTTATACAGGAGAAGAGGAGGAACAAAGTTAAGACCCCTTGCTCGAATTTAATGTCAAACCAATCGAACTCCACGTGTGTTCTTGAGAATCAATCTGACACCGCTTGTTCCGGAGTTAAGAGAAAACTTTCTTTTCAGGACACTGAGGAAACAGAAAACTACAAGAAGCTACATCGTCACTAG 990 0.397 MGSSLTATSFSLSSLMCEEEGEACFFEDNYDDENEHTGIVFHEEDEEEYIEYLFSQETAFGFHNHDDCSAATFWLRTARFDAIDWIFNTQAKLGFKVHTAYLSVSYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQNVPPLSEYSIVEYRFESKVIKNMELLILATLDWKMGSSSPTPFSYLHYFLTKFCPGSNSHTIITKATQHIVAMVKDVNLMDQRPSIIASAAILAAVDATLTRKTMDLRIRKISSWGNLESGDVFSCYNLIQEKRRNKVKTPCSNLMSNQSNSTCVLENQSDTACSGVKRKLSFQDTEETENYKKLHRH* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0558 329 Gene3D - 180 267 - -
Ahy5g0558 329 Gene3D - 77 179 - -
Ahy5g0558 329 CDD CYCLIN 79 169 IPR013763 -
Ahy5g0558 329 Pfam Cyclin, C-terminal domain 181 288 IPR004367 -
Ahy5g0558 329 SMART Cyclin_C_2 181 315 IPR004367 -
Ahy5g0558 329 SUPERFAMILY Cyclin-like 39 176 IPR036915 -
Ahy5g0558 329 Pfam Cyclin, N-terminal domain 51 176 IPR006671 -
Ahy5g0558 329 PANTHER CYCLINS 49 311 IPR039361 -
Ahy5g0558 329 SMART cyclin_7 84 170 IPR013763 -
Ahy5g0558 329 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Ahy5g0558 329 PANTHER CYCLIN-D5-1 49 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0558 Ahy-Chr5 6936955 6938795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0558 77 282 Core Cell Cycle Gene Families AT1G70210 39.151 2.27e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0558 K18811 - gmx:100798140 450.669