Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0543 ATGAAAGGAGCTGTTGATGACATCGATCTTGTAATAAAAACACTTGAAAAAAGTGGTTTCAGTCGTGATAGATTCTACATTCACTGTGATGCAGCTTTATTTGGAATCATGCTCCCTTTTCTCAAAGCAGCACCAAAGATAATAAGTTTCAAGAAACCCATTGGAAGTGTGAGTGTTTCGGGGCATAAATTCTTGGGATGTCCAATTCCCTGTGGAGTTGTAATAACCCGTTCAGAATACATGAATGCGTCATCAAGGGATGTTGAAATCATTGGTTCAAGAGATACAACAATCACAGGTAGTCGATGTGGACATGCTCCAATCTTCCTTTGGTATGCAATCAAAAAGAAAGGCTCAATAGGGATTCAAAACGAAGTGGAAAATTGCATAGCCAATGCACGTTACTTGCACAATCGACTAAGTGATGCTGGAATTGGTGCAATGTTAAATGAGCATAGCAACATTGTTGTGTTTGAGAGGCCTCTTGATCATGAATTTAGCAGTAGGTGGAACTTGGCGTGCCAAGGGAACATTGCACACGTGGTGGTCATGCAGCATGTTACCATTCAAATGTTGGATTCTTTTGTTACTGAGTTTCTTCATAAACGATCCTTTTCACGGTTTCAGGATTATGGCTCTTTTCAGCCTCTATGTATAGCAGAAAAAGTTAGCATTGCAAATTGTTCTTGCTCAATGCACAACTTATATCATGATTGTGCATGCTAG 726 0.3967 MKGAVDDIDLVIKTLEKSGFSRDRFYIHCDAALFGIMLPFLKAAPKIISFKKPIGSVSVSGHKFLGCPIPCGVVITRSEYMNASSRDVEIIGSRDTTITGSRCGHAPIFLWYAIKKKGSIGIQNEVENCIANARYLHNRLSDAGIGAMLNEHSNIVVFERPLDHEFSSRWNLACQGNIAHVVVMQHVTIQMLDSFVTEFLHKRSFSRFQDYGSFQPLCIAEKVSIANCSCSMHNLYHDCAC* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0543 241 PANTHER SERINE DECARBOXYLASE 1 233 - -
Ahy5g0543 241 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 56 77 IPR021115 GO:0016831
Ahy5g0543 241 Gene3D - 1 114 IPR015421 GO:0003824
Ahy5g0543 241 SUPERFAMILY PLP-dependent transferases 2 199 IPR015424 -
Ahy5g0543 241 Gene3D Aspartate Aminotransferase, domain 1 115 203 IPR015422 GO:0003824
Ahy5g0543 241 Pfam Pyridoxal-dependent decarboxylase conserved domain 4 151 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy5g0543 241 PANTHER - 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0543 Ahy-Chr5 6736154 6737094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0543 1 235 Calmodulin-binding Proteins AT1G65960 25.581 2.93e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0543 K25193 - gmx:100781665 351.288