Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0530 ATGGATACATTGTTTAGAGTAGTGAGTTTTGAAGAATACCAACAACAGCAACAAGTTGAGTTAGATCAGTCCCTCAACTCCACCACCACTACCACTACTTCCAGCAGCTCTAGATCCTCCCGACACAACTATCACCACTACCAACAACAGCAACAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTCTCCTCGTCTTCTTCCAAGCACCACTACTATCCCTATCACTCTCAATCCCATCCCCACACTTCCACTCCTCCCGCCACCATCCTCACGCCCAACGACTTCTCCCACTCCTTCGACTTCAACCTCCAATTCTCATCAAACACCAACTGGGCCACCGACATCCTCCTCGACGCCGCGCGTGCTCTTGCCGACAAGAACACCGCCCGTCTCCAGCACCTCATGTGGATGCTCAACGAGCTCAGCTCCCCTTACGGCGACACCGAACAGAAGCTCGCCGCCTACTTCCTTCAAGCGCTCTTCAGCCGCATGACGCATGCCGGTGATCGAACCTTCCGAACCTTAACCTCCGCCTCCGATAAGACCTGCTCCTTCGAATCAACCAGAAAGACGGTGCTCAAGTTCCAAGAGGTGTCTCCGTGGACGACCTTCGGACACGTGGCAGCCAATGGCGCAATCTTGGAGGCTTTGGAAGGTGAAACGAAGTTGCACATAGTTGATATCAGCAACACCTATTGCACTCAATGGCCAACGCTATTTGAGGCCTTGGCCACTCGCTCCGACGACACCCCGCACCTCAGGCTCACAACCGTCGTCGTAACAACTGCTCACGGCGGATCTGTCCCGGCGGCGCAGAGGGTCATGAAGGAGATAGGTGCCAGGATGGAAAAGTTCGCCAGGCTCATGGGAGTTCCGTTCAAGTTCAACGTCGTTCACCATTCCGGCGATCTCTCCCAGTTCGATTTCGGGGAATTGGACATCAGGGACGACGAGGCGCTGGCCGTTAACTGCGTCAACTCGTTGCACTCGATCGCCGCGGTTGGGAACCGCCGCGACGCGGTGATATCGTCGCTGAGAAGGCTTCAGCCCAGGATCGTGACGGTGGTGGAGGAAGAAGCCGATTTGGACGTTGGTTTGGAAGGATTCGAATTCGTGAAAGGGTTCCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGGCGCTGGAGGAGAGTTTTCCGAGGACGAGTAACGAGAGGCTGATGCTGGAGAGGGCGGCGGGGAGGGCGATGGTGGACTTGGTGGCGTGCTCGGCGGAGGAATCGTCGGAGAGGAGGGAGACGGCGGCGAGATGGTCGCAGAGGATGCATGGATCGGGGTTCAATACGGCGTCGTTTAGCGAGGAAGTGTGCGATGACGTTAGGGCGCTGCTGAGGAGGTACAAGGAAGGGTGGTCAATGGTACAGTGCTCGGATCACGGCGGAATGATGCTGTGGTGGAAGGAGCAGGCGGTGGTGTGGGCCAGTGCATGGAGGCCCAGCTTCACGTAG 1503 0.5589 MDTLFRVVSFEEYQQQQQVELDQSLNSTTTTTTSSSSRSSRHNYHHYQQQQQDEECFNFFMDEEDLSSSSSKHHYYPYHSQSHPHTSTPPATILTPNDFSHSFDFNLQFSSNTNWATDILLDAARALADKNTARLQHLMWMLNELSSPYGDTEQKLAAYFLQALFSRMTHAGDRTFRTLTSASDKTCSFESTRKTVLKFQEVSPWTTFGHVAANGAILEALEGETKLHIVDISNTYCTQWPTLFEALATRSDDTPHLRLTTVVVTTAHGGSVPAAQRVMKEIGARMEKFARLMGVPFKFNVVHHSGDLSQFDFGELDIRDDEALAVNCVNSLHSIAAVGNRRDAVISSLRRLQPRIVTVVEEEADLDVGLEGFEFVKGFQECLRWFRVYFEALEESFPRTSNERLMLERAAGRAMVDLVACSAEESSERRETAARWSQRMHGSGFNTASFSEEVCDDVRALLRRYKEGWSMVQCSDHGGMMLWWKEQAVVWASAWRPSFT* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0530 500 Pfam GRAS domain family 118 496 IPR005202 -
Ahy5g0530 500 MobiDBLite consensus disorder prediction 19 48 - -
Ahy5g0530 500 PANTHER PROTEIN SHORT-ROOT 1 496 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Ahy5g0530 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 496 IPR005202 -
Ahy5g0530 500 MobiDBLite consensus disorder prediction 71 93 - -
Ahy5g0530 500 ProSiteProfiles GRAS family profile. 107 496 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0530 Ahy-Chr5 6599076 6601274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0530 1 498 GRAS Transcription Factor Family AT4G37650 62.268 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy5g0530 GRAS 1.60E-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0530 - - gmx:100820459 666.381