Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0516 ATGGGAAGAGCACCTTGCTGTGACAAAGCGAACGTGAAGAAAGGGCCATGGTCGCCTGAAGAAGACGCGAAACTCAAGTCTTACATCGAGCAGCACGGCACAGGAGGCAATTGGATCGCCCTCCCTCAGAAGATAGGACTTAAGAGATGCGGGAAAAGCTGTCGTCTAAGATGGCTGAATTATCTTCGGCCAAACATTAAACACGGTAGTTTCTCAGAAGAAGAAGACAACATCATCTGCACCCTGTATGTTAGTATTGGAAGCAGGTGGTCTATTATAGCAGCACAGTTACCAGGGCGCACAGACAATGACATCAAGAACTACTGGAACACCAGGCTCAAGAAGAAGCTCCTTGCAAAGCAAAGGAAACTAGACCAACCTCCTCCTATTCCTTATTGCAATTCCTCTTCTAATTCTTCTTCTTCTTCTTCAGTTCCACAACTAGTAGTACCACCTGCACCGCCTTCCATCCACGACTACGATCTCACCTCCCTCATATCCTCCTTCCCACAGCAACACCACCTTTATCCACCGCCAAATATGTATCACCATCAGCAAGGCTTTGAAAGCTTATTGATAGATGATGATTTGAGCCATCTCATGGCGTGTGTAGTGAGTAATAATCAACAAATGGAAGTGCAGCAGGGTTTTTATGGCAGCACGACTTCAACAGAGAGCACTACTACTACTAGTTGGGGACCTGATATGACCTCTCTCGTTAACTACTCATCACCACCACCACCACCACCACCTTTGCTTTATCAAGATGACGCTTCACCTGCTTCTAGGTACTTTGGAATGCAAATGCTATAA 813 0.4613 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGSFSEEEDNIICTLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLAKQRKLDQPPPIPYCNSSSNSSSSSSVPQLVVPPAPPSIHDYDLTSLISSFPQQHHLYPPPNMYHHQQGFESLLIDDDLSHLMACVVSNNQQMEVQQGFYGSTTSTESTTTTSWGPDMTSLVNYSSPPPPPPPLLYQDDASPASRYFGMQML* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0516 270 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Ahy5g0516 270 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Ahy5g0516 270 MobiDBLite consensus disorder prediction 130 147 - -
Ahy5g0516 270 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Ahy5g0516 270 SMART sant 67 115 IPR001005 -
Ahy5g0516 270 SMART sant 13 64 IPR001005 -
Ahy5g0516 270 MobiDBLite consensus disorder prediction 218 249 - -
Ahy5g0516 270 CDD SANT 16 62 IPR001005 -
Ahy5g0516 270 PANTHER OS09G0431300 PROTEIN 1 142 - -
Ahy5g0516 270 MobiDBLite consensus disorder prediction 124 148 - -
Ahy5g0516 270 Gene3D - 69 131 - -
Ahy5g0516 270 Gene3D - 7 68 - -
Ahy5g0516 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Ahy5g0516 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Ahy5g0516 270 CDD SANT 70 113 IPR001005 -
Ahy5g0516 270 PANTHER OS09G0431300 PROTEIN 1 142 - -
Ahy5g0516 270 MobiDBLite consensus disorder prediction 218 240 - -
Ahy5g0516 270 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Ahy5g0516 270 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0516 Ahy-Chr5 6281774 6283212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0516 1 123 MYB Transcription Factor Family AT3G49690 92.683 2.15e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy5g0516 Myb_DNA-binding 1.60E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0516 K09422 - gmx:106795158 256.914