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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Ahy5g0514
ATGGGTCTTGATCAAGATGCCAACAACAATAACAATAATAACTCCTCCTCCTCAGGCCTCGAGCTTGTTCTAGGGTTATCTCTCACCACCACGACGGCCACACCACCTCCTCCGTCAACCAAACCCAAGCCGTATTCCTGTCATCATGAGGCACCAGAGCCATCTCTAACGCTGGGTCTATCCGGCGAGAGCTTCCTGAAAAGCAATAATAATAAAGTCGCAGAGGAGCCTACAAGTGGTGAAATGTGTAGACAGGCTTCATCGCCACACAGTAGCGCAGTTTCGTCGTTCTCAAGTGGGGGGTGCAGGGTGGTGGGGGCGTGCGTGAAGAGGGAGAGGGATCTTAGTAGCTGTGAAGAGGCAGATGGTGATGGCGATGGCGAGAGAGTTTCTTCCAGAGTGAGCGACGAAGATGAAGACGGCAGCAATGCCCGAAAGAAGCTGAGGCTCACAAAGGAACAATCTGCTCTTCTTGAAGACAGCTTCAAACAACACAGCACTCTCAATCCTAAACAGAAGCAAGCTTTGGCGAGGCAGTTAAATCTGAGGCCTCGGCAAGTAGAAGTGTGGTTCCAGAATAGGAGAGCGAGAACAAAGCTGAAGCAGACGGAAGTGGACTGCGAGTTCTTGAAGAAATGCTGCGAAACATTGACGGACGAGAACAGAAGGCTAAAGAAAGAGCTTCAAGAACTGAAGGCGCTGAAGCTGGCACAACCCTTGTACATGCCTATGCCGGCGGCAACGCTCACCATCTGCCCCTCTTGCGAGAGGCTCTCCAACGACCCCCCCGCCAAGCCTCACTTCTATAACCCCTTCACCAACCCCTCTGCAGCATGTTGA
840
0.5214
MGLDQDANNNNNNNSSSSGLELVLGLSLTTTTATPPPPSTKPKPYSCHHEAPEPSLTLGLSGESFLKSNNNKVAEEPTSGEMCRQASSPHSSAVSSFSSGGCRVVGACVKRERDLSSCEEADGDGDGERVSSRVSDEDEDGSNARKKLRLTKEQSALLEDSFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLAQPLYMPMPAATLTICPSCERLSNDPPAKPHFYNPFTNPSAAC*
280
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Ahy5g0514
279
ProSiteProfiles
'Homeobox' domain profile.
141
201
IPR001356
GO:0003677
Ahy5g0514
279
SMART
halz
201
244
IPR003106
GO:0006355|GO:0043565
Ahy5g0514
279
SUPERFAMILY
Homeodomain-like
134
202
IPR009057
-
Ahy5g0514
279
Coils
Coil
207
237
-
-
Ahy5g0514
279
SMART
HOX_1
143
205
IPR001356
GO:0003677
Ahy5g0514
279
MobiDBLite
consensus disorder prediction
116
150
-
-
Ahy5g0514
279
CDD
homeodomain
145
202
IPR001356
GO:0003677
Ahy5g0514
279
ProSitePatterns
'Homeobox' domain signature.
176
199
IPR017970
GO:0000981|GO:0006355
Ahy5g0514
279
Pfam
Homeodomain
145
199
IPR001356
GO:0003677
Ahy5g0514
279
Gene3D
-
138
206
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Ahy5g0514
Ahy-Chr5
6247561
6249003
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Ahy5g0514
1
279
Homeobox Transcription Factor Family
AT4G37790
55.732
5.15e-92
272
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-HD-ZIP
Ahy5g0514
Homeodomain
1.90E-16
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Ahy5g0514
K09338
-
gmx:100795135
300.827
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Ahy5g0514
5
6247561
6249003
Ahy11g1066
11
28511225
28514485
PCT
Ahy5g0514
5
6247561
6249003
Ahy1g1111
1
23515993
23518917
PCT
Ahy11g1066
11
28511225
28514485
Ahy5g0514
5
6247561
6249003
PCT
Ahy1g1111
1
23515993
23518917
Ahy5g0514
5
6247561
6249003
PCT
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