Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0497 ATGATGGAAATTGCATCCAGCAACTACTTGGCTGAATTTGGAATGGAAGAATATTCTAGCAGCTTCCAGGAATACCCGATGATGATGAATTCATTTGAAGAAATGCTTGATAAGTTTGAGATGGACATGCAATCTATGTCATCAGCCTACTCTGAAACCAAACCACCACCACATCAACTTCAATCCCCTTTTAACACTGCCATGCCTTCTAGATCCGCCTCTCCATCACCACCCAAACTTATCTCCTTTGAGGCACCGTCTCTTCCTAATTCTTCCAACATTAAGAACCCTAATCTGATGATGGACGACCACATTCACTTCTCTGCTTTCTTCAACCATGATAATCCACCGCATAAGGTCCTTCCCGCCACAGCTAGGAACCCAATCCAAGCTCAGGAGCATGTAATCGCCGAAAGAAAACGCCGGGAAAAGCTCAGCCAGAGGTTCGTCGCTCTTTCCGCCATGGTCCCTGGCCTCAAGAAGATGGACAAGGCTTCAATTTTAGGAGATGCCATAAAATATGTGAAGCAACTACAGGAACGAGTGCAGTTTTTGGAGGAGGAGAAGGCTAGAAAGAAAACTATGGTTGAATCAGGGGTGGCAGTAAAGAGATGTTTCGTGTTTGTTGAAGATGAAGATAATAATGAGAACGAAATTTCAGCAGCAGCAGCATTATTGGATGGAAATTGTAATACACTTCCGGAAATCAAAGCAAGAGTTAGTGGTAAAGACGTACTCATCAGAATCCACTGCCATAAACAAGAGTGCAAGAACAGTAGGGGTGCTCGTGAGGCTGCAATACTCTCCGTATTAGAGAAGCATAATCTCACTGTTCACACAACCACCTCTTTGCCCTTCGGCAATGACACTCTCGATATCACTATTCTCGCTCAGATGAAGAAGGAATGCTCCATTAGGACAAAGGATCTAGTAGGAAGCCTACGGGTGGCATTGACACAATTCAGTTGA 969 0.4427 MMEIASSNYLAEFGMEEYSSSFQEYPMMMNSFEEMLDKFEMDMQSMSSAYSETKPPPHQLQSPFNTAMPSRSASPSPPKLISFEAPSLPNSSNIKNPNLMMDDHIHFSAFFNHDNPPHKVLPATARNPIQAQEHVIAERKRREKLSQRFVALSAMVPGLKKMDKASILGDAIKYVKQLQERVQFLEEEKARKKTMVESGVAVKRCFVFVEDEDNNENEISAAAALLDGNCNTLPEIKARVSGKDVLIRIHCHKQECKNSRGAREAAILSVLEKHNLTVHTTTSLPFGNDTLDITILAQMKKECSIRTKDLVGSLRVALTQFS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0497 322 MobiDBLite consensus disorder prediction 46 77 - -
Ahy5g0497 322 PANTHER BHLH TRANSCRIPTION FACTOR 8 321 - -
Ahy5g0497 322 Coils Coil 168 195 - -
Ahy5g0497 322 SMART finulus 135 184 IPR011598 GO:0046983
Ahy5g0497 322 CDD bHLH_AtNAI1_like 131 203 - -
Ahy5g0497 322 Pfam Helix-loop-helix DNA-binding domain 132 179 IPR011598 GO:0046983
Ahy5g0497 322 Gene3D - 130 203 IPR036638 GO:0046983
Ahy5g0497 322 PANTHER TRANSCRIPTION FACTOR NAI1 8 321 - -
Ahy5g0497 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 178 IPR011598 GO:0046983
Ahy5g0497 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 193 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0497 Ahy-Chr5 6050804 6052495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0497 125 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 48.485 9.56e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy5g0497 HLH 2.80E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0497 - - aip:107642660 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0497 5 6050804 6052495 Ahy11g1049 11 26752990 26755826 PCT
Ahy5g0497 5 6050804 6052495 Ahy1g1135 1 25512544 25515308 PCT
Ahy11g1049 11 26752990 26755826 Ahy5g0497 5 6050804 6052495 PCT
Ahy1g1135 1 25512544 25515308 Ahy5g0497 5 6050804 6052495 PCT