Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0480 ATGGGAAGAACCTCCTCACTCTGCAACCTCTTCTCTTGCTTCGCACCACCCTCCACCAACGACCACCACCAACAACCACCCGAGCTCGCATTCCAAGAAACCGAACCGCTAGACGAAACCCTAGGTCACTCATTCTGCTACGTCAGATCCTCAAATCGCTTCGTCTCTTCTCCCACTCACTCACCCTCTCATTCCGATCGCTTCCTCTCTTCCCCTTCCGCCTCCCTCCGCTTCTCCCCAACCCACACCGAACCCGTTTTCAAGTCCATTTCCGGTGCCTCCGTTAGCGCCAACAGCTCCGCTCCCAAAACCGTTCTCCAATTTGACGCTGATGCCGCAGCTGGTTTCCCTCCCAGGGGCAGTATCGTAAATGGATTCGAAGCCACGTCGTCGTTTAGCGCACTCCCGCTTCAGCCAGCTCCCAGAGGCAATGGTGAGCCTTCTGGAAGGGCTTTCTTCCTCTCCGGTCCAATCGAGAGCGGAGCTATGTCTGGTCCACTTGACGCCGGCGCCGCCGCGGAAGGGGGAGGACCCGCCTCCAGCGCCGGTGTTCCTTTCTCGGCGCCGCTGGGCGGGTTGTACGCCAAGAAGAAGCGGAAGAAGGGGATCCCCGGGCTTAGGAAGGCGTTCCATCGGAGAAGCCTCTCGGAGATGAAGCGGCCTTGGGTGGTGCCCGTGCTGAACTTCGTCGGGAGGAAGGAAGATCCGCCGGAGACTGAAGGAGGGAGCGGGGCTGCAGCGCCGGAGGTGGGGAAGGGCGAGAGCAATGTGCAGTGGGCGCTGGGGAAGGCAGGGGAGGATCGCGTGCACGTGGTGGTGTCGGAGGAGCAGGGTTGGTTGTTCGTGGGGATCTACGACGGCTTCAACGGCCCCGACGCGCCGGAGTTCTTAATGGGTCACCTCTACCGTGCTGTTCACAGTGAGCTTCAGGGGTTGTTTTGGGAAGTCGAAGAAGAAGAAAAAGCAGTGGAAACTAACCCCTCGAGTGAACCTGCATCTGCACCTGCAGCTGAATCGTCAATGGCTGCTGAAGAAGATTTCAAGGACGACGGAGGGTCAGCAAAGAGAGTGACATTTCAGGTGGAGGGAACGGAGAGCAGGCGGCGCAGGCTGTGGGAGCTTCTTGCGGAGGATGCTGCTGAAGATGGGCTTGATCTTTCGGGTTCGGACAGGTTTGCATTTTCGGTTGATGATGCACTCAGCGTGAGCAAGGAGGGCTCATCAGGTAGTAGAAGGTGGATGGTGTTGTCAAAATTGAAGCATGGATTGTCAAAGCACAAGGAGGGCCGTGGGGGGAAGTTGTTACCTTGGAACTTGGCTACGGAAGATAAAGAGAAGGTTGAAGTGGAAACCCGGGCAGAAGAGAAATCTCATGGTGGGGATGGCACTGGCAATGGCAATGGTGGTGGTAGAAGACGGAAAGTGGGTCCAGTGGATCATGATCTGGTTTTGAGGGCATTGTCTCGGGCACTTGAGATGACAGAACTTGCATATTTGGATATGACGGATAAAGTTATCGATACAAATCCGGAGCTTGCTCTAATGGGGTCTTGCCTTCTAGTTGCTTTGATGAGGGGCGAGGATGTGTATGTGATGAACGTGGGTGATAGCAGGGCCATTGTTGCTCAGTATGAGCCCATAGAAGTTGGTTGTAGCAAGGAATCCGGAAGTCATGGGGATGTTGGGTCAGGTGCAGAGAGCATTACAGAGGAGTCTTCATTAGGCCAAGGTGAACGTGCCATCAGGTCGGGGAAGGAGGGTCCTGCTCAGGAAATGAGGTTGGTGGCATTGCAATTGTCCACTGACCACAGCACGAGTGTTGAAGAGGAAATCATTAGGATCAAGAATGAACATCCTGATGATAGCCACTGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAGGTCACCAGAGCGTTTGGGGCAGGATTTTTGAAACAGCCAAAATTCAATGATGCAGTACTAGAAATGTTTCGAAATGAATATATTGGAACTGCTCCATATGTATCCTGCTGCCCTTCATTACGTCATCATAGATTATGCCCTAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTGGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCCCAACATTTGATTGAGGAGCTGCTTGTCCGTGCAGCCAAAAAGGCTGGAATGGATTTTCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTCGAAGGAAGAATCTGGAAGTCATCAGGGAAGTACCCGTGA 2331 0.529 MGRTSSLCNLFSCFAPPSTNDHHQQPPELAFQETEPLDETLGHSFCYVRSSNRFVSSPTHSPSHSDRFLSSPSASLRFSPTHTEPVFKSISGASVSANSSAPKTVLQFDADAAAGFPPRGSIVNGFEATSSFSALPLQPAPRGNGEPSGRAFFLSGPIESGAMSGPLDAGAAAEGGGPASSAGVPFSAPLGGLYAKKKRKKGIPGLRKAFHRRSLSEMKRPWVVPVLNFVGRKEDPPETEGGSGAAAPEVGKGESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHSELQGLFWEVEEEEKAVETNPSSEPASAPAAESSMAAEEDFKDDGGSAKRVTFQVEGTESRRRRLWELLAEDAAEDGLDLSGSDRFAFSVDDALSVSKEGSSGSRRWMVLSKLKHGLSKHKEGRGGKLLPWNLATEDKEKVEVETRAEEKSHGGDGTGNGNGGGRRRKVGPVDHDLVLRALSRALEMTELAYLDMTDKVIDTNPELALMGSCLLVALMRGEDVYVMNVGDSRAIVAQYEPIEVGCSKESGSHGDVGSGAESITEESSLGQGERAIRSGKEGPAQEMRLVALQLSTDHSTSVEEEIIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKFNDAVLEMFRNEYIGTAPYVSCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLVRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0480 776 PANTHER PROTEIN PHOSPHATASE 2C 29 23 774 - -
Ahy5g0480 776 Pfam Protein phosphatase 2C 598 729 IPR001932 -
Ahy5g0480 776 Pfam Protein phosphatase 2C 488 547 IPR001932 -
Ahy5g0480 776 MobiDBLite consensus disorder prediction 448 476 - -
Ahy5g0480 776 MobiDBLite consensus disorder prediction 342 360 - -
Ahy5g0480 776 SUPERFAMILY PP2C-like 263 765 IPR036457 -
Ahy5g0480 776 Gene3D - 248 771 IPR036457 -
Ahy5g0480 776 MobiDBLite consensus disorder prediction 553 587 - -
Ahy5g0480 776 SMART PP2C_4 250 762 IPR001932 -
Ahy5g0480 776 CDD PP2Cc 479 764 IPR001932 -
Ahy5g0480 776 ProSiteProfiles PPM-type phosphatase domain profile. 249 764 IPR001932 -
Ahy5g0480 776 MobiDBLite consensus disorder prediction 318 360 - -
Ahy5g0480 776 PANTHER PROTEIN PHOSPHATASE 2C 23 774 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0480 Ahy-Chr5 5780710 5785981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0480 35 775 PP2C-type Phosphatase Gene Family AT2G35350 58.207 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0480 - - gmx:100775371 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0480 5 5780710 5785981 Ahy11g1170 11 35431391 35437187 PCT
Ahy5g0480 5 5780710 5785981 Ahy1g1166 1 29827474 29832699 PCT
Ahy11g1170 11 35431391 35437187 Ahy5g0480 5 5780710 5785981 PCT
Ahy1g1166 1 29827474 29832699 Ahy5g0480 5 5780710 5785981 PCT