Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0469 ATGATACTTAAACTGAACCTTGTTTTGGTTGATGATCTTCTTCTTCAGACTTCAGAGGGCATGGGATTGAGTGATGATGCCAAACCAGCTATGGTTTGCACTGCCAATGATTTACATGGTTGGAAGGACTTTCCAAAGGGTCTTAGGGTTCTTCTCCTTGAAAGAGACAGCACTTCTGCTTCTGAGATAAGAGCCAAACTTGAGGCCATGGACTATCACGTTTCTACCTTCTACGATGAGAATGAAGCATTGTCAGAAATTTCAAATAGGCTCGAAGGATTCCATGTGGCCATTGTGGAGGTGAGTACAAGTAGCAGCCAGAGAGGCTTTAAATTTCTTGAGAGTGCCAAGGACTTGCCAACCATCATGACTTCAGATACTCAGTGCTTGAGCACTATGATGAAGTGCATTGCGCTTGGCGCTGTTGAGTTCCTATGTAAACCACTCTCTGAGGACAAACTCAGAAATATCTGGCAGCATGTGGTTCATAAGGCATTCAATGCTGGGGCAAGTGTCTTGTCCGAATCACTAAAACCGGTTAAAGAGTCTGTAGAATCCATGTTGCAGCTGCAAACAGAAAATGGACATCATGAGAGTAAAATTTCCATTGATTTAGAGAATATATCAAGGTTTAGTGATAATTACCATGAGCAGTCTGCCGGAAGTGATAAATATCCGGCTCCTTCGACGCCTCAATTAAAACAGGGAGCAAGGTTACTGGATGATGGTGATTGCCAAGAGCATACAAATTGCTCGAATGAAAAAGAAAGTGGGGAACATGAAGGGGAATCTAAATCTGTTGAAGCATCAAGTGAGAATTTGAATGAAGGTACTCAACCACAGAAACCTGAAAAAGAGACTCTAATTAAACAGGAAGAGGATTTTGTTGCTGATGGTTCCAATGGTGAAAGTACTGTTCCTTTGAATCCTCATGATAGAAGGTCTCTTAGAAGCACCAATGGAAATATAACATCTCCAAATAAAGCAGTGGTCCTTAGTGATACATGTCAAAACAAAGCTAACCGGAAGAAGTTGAAAGTAGACTGGACTCCTGCATTGCACAAAAAGTTTGTGCAGGCAGTGGAACAACTAGGTATTGATCAAGCCATTCCTTCTCGCGTACTGGAGCTGATGAAAGTGGAGGGCTTGACTAGGCATAATGTGGCAAGCCATCTTCAGAAATACAGACTACATAAGAGGCAAATGATGCCCAAGGAAGAAGATCGAAGATGGCAAAATCAAAGAGATACGGTGCGCTGGAAAAGGCCAGTTATGGCCTATCCTCCACATCATTATAATCATGGCCTGTCTCCACCTCCTGTATATCCAATGTGGGGACAATCCGGAACTCAAACAACCGGTGCACAGTTTTGGGGACCTCCTGGTTATACCTGGTTGCAGCCTACAGAAAATTGGCACTGGAAGCCTTTTCCAGGGGTGCATGTGGATGCATGGGGTTGTCCAGTGTTGCCAGCTACTCAAGCTCCTTACCTTTCTTACACTCAACATATGGCTGGATTGCACAATGGTAAATCAGTGGATTATAGATATGGCATGCCACCAAGTTCATTTGAGCATTATCCGGCAGATGAAGTTGTTGACAAAGTTGTAAAGGAAGCAATAAGCAAGCCGTGGCTACCGTTACCCTTGGGCCTCAAGCCTCCTTCCACGGACAGCGTGTTGGCCGAGCTCTCCAGGCAAGGCATATCCCCCATCCCTCTTGACTCTAAGGGCTCTAAACCCTGCTGA 1749 0.4437 MILKLNLVLVDDLLLQTSEGMGLSDDAKPAMVCTANDLHGWKDFPKGLRVLLLERDSTSASEIRAKLEAMDYHVSTFYDENEALSEISNRLEGFHVAIVEVSTSSSQRGFKFLESAKDLPTIMTSDTQCLSTMMKCIALGAVEFLCKPLSEDKLRNIWQHVVHKAFNAGASVLSESLKPVKESVESMLQLQTENGHHESKISIDLENISRFSDNYHEQSAGSDKYPAPSTPQLKQGARLLDDGDCQEHTNCSNEKESGEHEGESKSVEASSENLNEGTQPQKPEKETLIKQEEDFVADGSNGESTVPLNPHDRRSLRSTNGNITSPNKAVVLSDTCQNKANRKKLKVDWTPALHKKFVQAVEQLGIDQAIPSRVLELMKVEGLTRHNVASHLQKYRLHKRQMMPKEEDRRWQNQRDTVRWKRPVMAYPPHHYNHGLSPPPVYPMWGQSGTQTTGAQFWGPPGYTWLQPTENWHWKPFPGVHVDAWGCPVLPATQAPYLSYTQHMAGLHNGKSVDYRYGMPPSSFEHYPADEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISPIPLDSKGSKPC* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0469 582 SUPERFAMILY CheY-like 46 164 IPR011006 -
Ahy5g0469 582 Gene3D - 45 165 - -
Ahy5g0469 582 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 344 399 IPR006447 GO:0003677
Ahy5g0469 582 MobiDBLite consensus disorder prediction 283 297 - -
Ahy5g0469 582 MobiDBLite consensus disorder prediction 215 229 - -
Ahy5g0469 582 MobiDBLite consensus disorder prediction 240 267 - -
Ahy5g0469 582 ProSiteProfiles Response regulatory domain profile. 49 162 IPR001789 GO:0000160
Ahy5g0469 582 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 341 400 IPR017930 -
Ahy5g0469 582 Pfam Myb-like DNA-binding domain 347 396 IPR001005 -
Ahy5g0469 582 MobiDBLite consensus disorder prediction 215 327 - -
Ahy5g0469 582 MobiDBLite consensus disorder prediction 302 327 - -
Ahy5g0469 582 Gene3D - 340 402 - -
Ahy5g0469 582 MobiDBLite consensus disorder prediction 268 282 - -
Ahy5g0469 582 PANTHER TWO-COMPONENT RESPONSE REGULATOR-APRR2-LIKE PROTEIN 31 580 - -
Ahy5g0469 582 PANTHER TRANSCRIPTION ACTIVATOR GLK1 31 580 IPR044825 GO:0003700|GO:0045893
Ahy5g0469 582 SUPERFAMILY Homeodomain-like 343 401 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0469 Ahy-Chr5 5613157 5619296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0469 31 576 Response Regulator Gene Family AT4G18020 49.132 2.29e-143 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Ahy5g0469 Myb_DNA-binding 3.30E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0469 - - gmx:100779121 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0469 5 5613157 5619296 Ahy11g1184 11 36333879 36340250 PCT
Ahy5g0469 5 5613157 5619296 Ahy1g1177 1 30469071 30475445 PCT
Ahy11g1184 11 36333879 36340250 Ahy5g0469 5 5613157 5619296 PCT
Ahy1g1177 1 30469071 30475445 Ahy5g0469 5 5613157 5619296 PCT