Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0444 ATGGAGGAACGGTATGAGCCAATCAAGGACCTTGGTTCTGGAAATTTCGGAGTTGCTAGGTTGGCTAAAGACAAGAAAACAGGGGAGCTTGTTGCTGTTAAATACATTCAAAGGGGTAAAAAGATTGATGAGAATGTTCAAAGGGAGATAATTAACCACCGATCTCTAAGGCACCCTAACATTATCAGGTTCAAAGAGGTGTTTCTCACTCCAACTCATTTAGCTATTGTTCTGGAATATGCTGCTGGTGGTGAACTCTTTGGGAGGATTTGTACAGCTGGTCGATTTAGCGAAGATGAGGCAAGATTTTTCTTCCAGCAACTCATATCTGGAGTTAGCTACTGTCATTCAATGCAAATTTGTCATAGAGATCTGAAACTGGAAAACACTCTCTTGGACGGTAATCCCGCACCTCGACTTAAGATTTGTGACTTCGGTTTCTCCAAGTCTGCATTGCTGCATTCGCAGCCTAAGTCAACAGTTGGAACACCAGCATATATTGCTCCAGAGGTTTTGTCTCGAAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCATGTGGGGTGACTCTGTATGTAATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAGAGACTTCAGAAAGACTATTGGGAGAATAATGAGCGTGCAGTATTCTATACCTGATTATGTGCGTCTTTCTTCAGAGTGTAGGCATCTTCTCACTTGCATTTTTGTTGCCAATCCAGCCAAGAGGATTACTATTCCGGAGATAAAACAGCACACATGGTTCTTGAAGAACTTGCCTAGAGAGATAATTGAGGCTGATAGAAGAATCAATGAAGAAAGTGGGAAGGAGGAGCCACCAAGCCAAAGTGTTGAAGAAATCATGCGTATAGTCAAAGAGGCAAGGAAACCATATCCAGGATTAAAATTGGATTCTGAAGATGCTGAAGTTAAAGAGGGACTTAATGTTATTGAAGACTCTAAAAAACCTCTTTCATCCTTAACTTAA 1005 0.4119 MEERYEPIKDLGSGNFGVARLAKDKKTGELVAVKYIQRGKKIDENVQREIINHRSLRHPNIIRFKEVFLTPTHLAIVLEYAAGGELFGRICTAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRDFRKTIGRIMSVQYSIPDYVRLSSECRHLLTCIFVANPAKRITIPEIKQHTWFLKNLPREIIEADRRINEESGKEEPPSQSVEEIMRIVKEARKPYPGLKLDSEDAEVKEGLNVIEDSKKPLSSLT* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0444 334 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0444 334 SUPERFAMILY Protein kinase-like (PK-like) 3 269 IPR011009 -
Ahy5g0444 334 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0444 334 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 302 - -
Ahy5g0444 334 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Ahy5g0444 334 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Ahy5g0444 334 CDD STKc_SnRK2 4 260 - -
Ahy5g0444 334 PANTHER SERINE/THREONINE KINASE 3 302 - -
Ahy5g0444 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Ahy5g0444 334 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Ahy5g0444 334 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0444 Ahy-Chr5 5224570 5226846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0444 4 271 CBL-interacting serine-threonine protein kinases AT4G24400 43.682 2.45e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Ahy5g0444 Pkinase 1.80E-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0444 K14498 - gmx:100817713 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0444 5 5224570 5226846 Ahy11g1239 11 40794645 40798517 PCT
Ahy11g1239 11 40794645 40798517 Ahy5g0444 5 5224570 5226846 PCT