Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy5g0425 | ATGGCGAACCCAGCTGAACTTTCTGCCCTCAATCAAATCAAAATTCATCTTCTTGGAGAACTCTCACCACTTCCTCATAACTCTTCCTTCTCCTTCCAATTTTACCAAACTAACCCTACTACTTCTTCTTCCTCCTCCTCCTCCTCTTCTTCTTCTGCTTCGGTCAACCAATACTTTAACTGCAACGAAGTGGTCAACAACCTAGAAACGCCAAGATCCAAACCGCACTCATCGGCGTCTTCGTCGAACCGAAAACCGTCTCTGCAAATCTCTCTCCCTAAGAAAACCGAATGGATCCAATTCGGAGAGGAGAAGGAGATTTCCAAGAGCAGCGAACAACAGAAGAAGAAGCACTATAGAGGGGTAAGACAGAGACCGTGGGGAAAGTACGCCGCCGAGATTCGAGATCCTAACAAGCGAGGCTCCAGAGTCTGGCTTGGAACATTCGACACCGCCATCGATGCCGCCAAGGCTTACGACCGCGCCGCCTTTAAGCTCCGCGGCTCAAAAGCCATCCTCAACTTCCCTCTCGAAGCCGGCGCCGATGACAGGAAGCGCCCCCGTCAAGAGGAGGAGGTGGAGGAGAAGCCGGTCGTCAAGAAGGAGAAGATGGAGGAATCATCTGACGTTAGTGGTGTAAGAGATATTCCGTTAACGCCGTCTAGTTGGACTGGCTTTTGGGACGCTGACGTAACTGGTATTTTCAGTGTGCCACCGTTATCGCCGTTATCTCCCCACCCGGCGTTCGGATTTCCACAGCTTATGGTTGTGTGA | 774 | 0.5116 | MANPAELSALNQIKIHLLGELSPLPHNSSFSFQFYQTNPTTSSSSSSSSSSSASVNQYFNCNEVVNNLETPRSKPHSSASSSNRKPSLQISLPKKTEWIQFGEEKEISKSSEQQKKKHYRGVRQRPWGKYAAEIRDPNKRGSRVWLGTFDTAIDAAKAYDRAAFKLRGSKAILNFPLEAGADDRKRPRQEEEVEEKPVVKKEKMEESSDVSGVRDIPLTPSSWTGFWDADVTGIFSVPPLSPLSPHPAFGFPQLMVV* | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy5g0425 | 257 | Gene3D | AP2/ERF domain | 117 | 178 | IPR036955 | GO:0003700|GO:0006355 | |
Ahy5g0425 | 257 | SMART | rav1_2 | 118 | 182 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy5g0425 | 257 | MobiDBLite | consensus disorder prediction | 104 | 123 | - | - | |
Ahy5g0425 | 257 | MobiDBLite | consensus disorder prediction | 66 | 89 | - | - | |
Ahy5g0425 | 257 | PRINTS | Ethylene responsive element binding protein signature | 119 | 130 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy5g0425 | 257 | PRINTS | Ethylene responsive element binding protein signature | 158 | 178 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy5g0425 | 257 | ProSiteProfiles | AP2/ERF domain profile. | 118 | 176 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy5g0425 | 257 | MobiDBLite | consensus disorder prediction | 182 | 210 | - | - | |
Ahy5g0425 | 257 | Pfam | AP2 domain | 118 | 168 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy5g0425 | 257 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 3 | 242 | - | - | |
Ahy5g0425 | 257 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 | 3 | 242 | - | - | |
Ahy5g0425 | 257 | MobiDBLite | consensus disorder prediction | 182 | 214 | - | - | |
Ahy5g0425 | 257 | CDD | AP2 | 117 | 176 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy5g0425 | 257 | SUPERFAMILY | DNA-binding domain | 118 | 177 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy5g0425 | Ahy-Chr5 | 4936794 | 4937804 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy5g0425 | 1 | 257 | AP2-EREBP Transcription Factor Family | AT5G47230 | 47.333 | 2.57e-72 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Ahy5g0425 | AP2 | 1.70E-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy5g0425 | K09286 | - | gmx:100808173 | 262.307 |