Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0420 ATGGCTTCATTCACCTACTTCTCCTTCTTCTTCTTCTTCATTCTCCTCTTGGTTTTAACCTTCCAAACCTCAACCACCAAAGCCACATATTCAAGCTACCATGATTCATCCAAGTGCAGCCATGATGGCCCTTCCATCCACTATCCATTCCACATAAAAGGATCCCTCCCTGGCTTTGAACTCCTCTGCAAGGAAAACCTCACCACTATCCATTTTCCATCTTATGGTGATTTGGTTGTCAAATCCATTAGCTATGATACCAAAAAGATTCAGCTTCTTGATCCCAAGAACTGTGTTCATGGTGTCTTTCTCAACCTCAATCTCTCATCTACACCTTTCCAATACTACCATGTTCTGAAGAACTACACATACCTCAATTGCTCTACAAAGCTATCTACCCCTTCTTTCACTGAGGTTCCATGCTTGAGTGCCTCAGGTTCTCATGTTTACACTGTCGACCCTGAACTGCATGTGCCTGGTTCTTGCAACGGTTTCAAAACCGTGGCAATTCCCTTTGAGTATAGCCCTTATATCTCAGACAATAGTCTTGGTCTTGCATTGACATGGAACTTGCCGCATTCTGAAGAAAGAAAAGATAAAGCAATAAGCAAGACCACAGATTCCCACACAACACGTTACACAGTTTTAGGATTGAGCATGTGTTCTTTGGCGGTGGCAATTGCACTTATGATGATAAGCATAATAAAGGTTACTGGGTCCACATGGAATTGCAGTGAGAAAGAGGACCCATTATTGCAGAGCTTGCCAAATGTCTACTCCACTATATTCTAA 792 0.4242 MASFTYFSFFFFFILLLVLTFQTSTTKATYSSYHDSSKCSHDGPSIHYPFHIKGSLPGFELLCKENLTTIHFPSYGDLVVKSISYDTKKIQLLDPKNCVHGVFLNLNLSSTPFQYYHVLKNYTYLNCSTKLSTPSFTEVPCLSASGSHVYTVDPELHVPGSCNGFKTVAIPFEYSPYISDNSLGLALTWNLPHSEERKDKAISKTTDSHTTRYTVLGLSMCSLAVAIALMMISIIKVTGSTWNCSEKEDPLLQSLPNVYSTIF* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0420 263 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 250 - -
Ahy5g0420 263 Pfam Wall-associated receptor kinase galacturonan-binding 37 94 IPR025287 GO:0030247
Ahy5g0420 263 PANTHER PROTEIN, PUTATIVE-RELATED 11 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0420 Ahy-Chr5 4901384 4902665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0420 39 215 C3H Transcription Factor Family AT2G25410 30.729 8.55e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0420 - - ahf:112747752 518.85