Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0408 ATGAATATGAATGCACTAATAAGTAAGGTGGCTCGTGGATGGCACAAGTTTGATGCGCGTGTTCTCTTCTCTCTTTCTCTCTCTCCAACTGCAGCCAGATTCAGATTTCTGAGAGGGATTACTCCGCCTTCATTCATGGATCACTGGAATTTCTCCAAACCCCCATCCCTTCCGCAAGATTCACCCTCCGCTTCTCCCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTCCTGCCCTCCCGTCCAACCGATCCCACAGAGAAAAGGGGCAAGCGGAACCACCGCAGGATCCAGCTGTCGCCGCAAGGAAAGTTCAGAAGGCTGACCGCGAGAAACTCCGCCGTGATCGATTAAACGACCACTTCCACGATTTGGCCAACACTTTAGATCCTGATAGGCCAAGGAACGACAAGGCAACCATCCTCACTGATACAATTCAAATGCTTAAAGATTTAACTGCCGAAGTTAATAGGTTGAAAACCGAGCATAAAGCGCTTTCTGATGAGTCCCGCGAGCTAATGCAAGAGAAGAATGAACTCAGGGAAGAGAAGGCGTCCTTGAAATCGGATATAGAAAACCTTAATTCCCAGTATCAGCAGAGGGCCAGAATGATGTTCCCATGGACTGCAATCGACCACTCTGTCGTAATGGCACCACCACCTTATTCATATCCGGTTCCTATACCTATCCCTCCTGCTCCTGTTCCAATTCACCCAACTCTTCAACCCTTTCCTTATTTTGGAAATCAAAACCCTCCTCACATTCCTACTCCTTGTTCAACATATGTTCCATTCTCTGCTCCAATTAATGCCGCGCTTGACTTACCCTCAGCTCAGTATGCTTCTGCATCTCATGTTCCCGCCCAAAAGGATTGTCGGAGCAAGTCACCACCTCATAGGAGAATCACTGATGCAGACAGATGTAGCGAGACTCATGATGTGGCTACGGAGCTTGAACTTAAGATGCCTGGATCATCAACACAGGAGGAATCTTCTTCCGGGGGAACGAAGAAGGTCAAGCATTCAGGGAGGAAGGATAGAGCCGTTGCAGAAGGGAGTGCTTCAAGCCGGTATTCAACGTCTCATGGACTTCAAGATAGCTCCAACAGTGTGGGTGACATCCCAAAGGCTGATAGTTGA 1140 0.4895 MNMNALISKVARGWHKFDARVLFSLSLSPTAARFRFLRGITPPSFMDHWNFSKPPSLPQDSPSASPSPPPPPPPPPPPALPSNRSHREKGQAEPPQDPAVAARKVQKADREKLRRDRLNDHFHDLANTLDPDRPRNDKATILTDTIQMLKDLTAEVNRLKTEHKALSDESRELMQEKNELREEKASLKSDIENLNSQYQQRARMMFPWTAIDHSVVMAPPPYSYPVPIPIPPAPVPIHPTLQPFPYFGNQNPPHIPTPCSTYVPFSAPINAALDLPSAQYASASHVPAQKDCRSKSPPHRRITDADRCSETHDVATELELKMPGSSTQEESSSGGTKKVKHSGRKDRAVAEGSASSRYSTSHGLQDSSNSVGDIPKADS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0408 379 MobiDBLite consensus disorder prediction 50 119 - -
Ahy5g0408 379 PANTHER TRANSCRIPTION FACTOR BHLH121 82 378 IPR044579 GO:0003700|GO:0055072
Ahy5g0408 379 SMART finulus 108 158 IPR011598 GO:0046983
Ahy5g0408 379 MobiDBLite consensus disorder prediction 59 82 - -
Ahy5g0408 379 MobiDBLite consensus disorder prediction 292 317 - -
Ahy5g0408 379 MobiDBLite consensus disorder prediction 353 379 - -
Ahy5g0408 379 PANTHER TRANSCRIPTION FACTOR BHLH11 82 378 - -
Ahy5g0408 379 MobiDBLite consensus disorder prediction 285 379 - -
Ahy5g0408 379 MobiDBLite consensus disorder prediction 103 119 - -
Ahy5g0408 379 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 103 170 IPR036638 GO:0046983
Ahy5g0408 379 CDD bHLH_AtILR3_like 107 181 - -
Ahy5g0408 379 MobiDBLite consensus disorder prediction 334 351 - -
Ahy5g0408 379 SUPERFAMILY Formin homology 2 domain (FH2 domain) 68 78 - -
Ahy5g0408 379 Pfam Helix-loop-helix DNA-binding domain 103 152 IPR011598 GO:0046983
Ahy5g0408 379 Coils Coil 142 197 - -
Ahy5g0408 379 Gene3D - 101 178 IPR036638 GO:0046983
Ahy5g0408 379 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 102 152 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0408 Ahy-Chr5 4790407 4792536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0408 100 331 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 55.508 2.31e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy5g0408 HLH 5.10E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0408 - - ahf:112747741 681.789