Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0300 ATGGTACCCTCCTTTCCGGAATCAGATATTATGATTGTAGGATTGAAAACAACTAGTGAGGAAAAATCAGAATTTTCACCAAAATTACGGTCTGGAAGTTGTTCTGAGAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATCTGTGTTGATATTCTCCGAGAACATACTGGTCCATCAGTGAACCTTCCTTCTCCAGCAGCATTTTATGGGGTATTTGATGGGCATGGTGGCATTGATGCAGCATCATTTACAAGAAAGAACATCCTTAAGTTTATAATTGAAGATTCTCATTTCCCATCTGGAATCAAGAAAGCTGTAAATAGTGCTTTTGTGAAGGCTGATCATGCATTTAGGGATGCTAGTTCTCTTGATAGTTCTTCCGGCACCACCGCACTAATCGCCATTGTCCTGGGAAGGGACATGCTAATTGGGAATGCAGGGGATTCAAGAGCGGTTTTAGGGAAAAGAGGCAGAGCCATTGAACTCTCCAAAGACCATAAACCAAATTGCACATCAGAAAGACTAAGAATTGAGAAACTTGGTGGTGTGATCTACGACGGATACCTCAACGGCCAACTGTCAGTGGCTCGAGCCCTGGGAGACTGGCACATCAAAGGGTCTAAAGGGTCCAAGAGTCCCCTGAGCTCAGAGCCAGAGCTAGAGGAGATTGTGTTGACAGAAGAAGATGAGTTCTTGATAATGGGGTGTGATGGACTTTGGGATGTGATGAGTAGCCAGTGTGCTGTGACAATGGTTAGGAGGGAGCTGATGCAGCACAATGATCCAACAGAATGTGCGAAAGCGCTTGTCGCGGAGGCAATCCAACGCAACACTTGTGACAATCTAACAGTTGTGGTTGTTTGTTTCTCTTTGGATCCTCCTCCAAAGATTGAGATTCCTAGAGCTCATAGGAGAAGGAGCATTTCAGCTGAAGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATAG 975 0.4482 MVPSFPESDIMIVGLKTTSEEKSEFSPKLRSGSCSEKGPKQYMEDEFICVDILREHTGPSVNLPSPAAFYGVFDGHGGIDAASFTRKNILKFIIEDSHFPSGIKKAVNSAFVKADHAFRDASSLDSSSGTTALIAIVLGRDMLIGNAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTECAKALVAEAIQRNTCDNLTVVVVCFSLDPPPKIEIPRAHRRRSISAEGLDLLKGVLNGR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0300 324 Pfam Protein phosphatase 2C 31 282 IPR001932 -
Ahy5g0300 324 PANTHER PROTEIN PHOSPHATASE 2C 7 312 IPR015655 GO:0004722|GO:0006470
Ahy5g0300 324 ProSiteProfiles PPM-type phosphatase domain profile. 30 290 IPR001932 -
Ahy5g0300 324 SMART PP2C_4 20 288 IPR001932 -
Ahy5g0300 324 CDD PP2Cc 30 290 IPR001932 -
Ahy5g0300 324 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 7 312 - -
Ahy5g0300 324 SUPERFAMILY PP2C-like 22 290 IPR036457 -
Ahy5g0300 324 SMART PP2C_SIG_2 48 290 IPR001932 -
Ahy5g0300 324 Gene3D - 12 293 IPR036457 -
Ahy5g0300 324 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0300 Ahy-Chr5 3532005 3536200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0300 14 322 PP2C-type Phosphatase Gene Family AT3G51470 77.994 3.11e-180 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0300 K14803 - gmx:100786416 523.087