Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0299 ATGGAGCAGCAGTTATTGAGTTACGAGGAGACGATGTACAAATTGGATCAGACTGAGTACATTGTTGGCAGGCTTGATCGAGTGGCAACTGGTCTAAACATGGTTAAAGTTTGGTTCTTGGTGTTGATTATTCTCTCCAATGGATTCTATTCAAATGGGGCAGACATGCAAAATTTCACAGTACCTGAGGTTGTAAATATTGGGGCTCTCTTCTCTTTCAATGGCTCTTTTGGTAGAAGTGTAAAATTTGCTATAAAGGCTGCAGTTGATGATGTAAATTCTGATCCATCAATTCTTGGTAAAACAAAGCTGAATCTCATACTGCAAGAGGACACAAAATACAGAGGTTTTCTTAGCATTTCTGAGGTTTTGCAGGTTGCAACGAGACATACTGTGGCTATAATTGGTCCCCAGTCATCTGTTACAGCTCATGTCATAGCTCATATTGCAAATGAGCTCCAAGTTCCTCTGCTATCGTTTTCGGCTTTAGACCCTACCCTTCATTCACTTCAGTTTCCATTCTTTATTAGAACAGGTCATAGTGATCTTTATGTGATGACTGCAATAGCAGACTTTGTTGATCACTTTGGGTGGAAAGATGTTATTGCTTTCTATGTGGATGATGATAATGGGAGGAATGGAATCGGAGCTCTAGGCGACAAGCTCGCCGATAGGCGTTGCAGGATCTCGTTTAAGGCAGCTGTGAGTCCTGATGCAACTGATGAGGAGATTACTGATGTGCTTGTTCAGGTGGCTTTGGCAGAGTCAAGAGTTATAGTTCTTCACCTCAACACTGTTTGGAAACTCAAGGTTTTCAATCTTGCAAAGAATCTTGGGATGATGGAAACTGGTTATGTCTGGATAGGTACTACTTTTCTTTCTGCTGTGCTTGATATGGAAAGTCCCTTGTCTTCAGATAAAATGGATGATATTCAAGGAGTTATTACATTTCGTGTTTACACACCGGATTCTGAACTCAAAAGAAGGTTTGTTTCTAAGTGGAAGAATTTGACTCAAGCTGATAGTGCTAATGGAGGCCCTCTTGGTTTTACTCCTTTAATTCTATATGCTTATGATACTGTTTATGCTCTTGCACATGCACTTGATTCGTTTTTCAAACAAGGGAACAGAATCACTTTCTCAAATGATTCAAAGTTATCAGTGTTACAAGGTGACAACTTGCATCTTGATGCCTTGAACATCTTCAATGAAGGACCTTCCTTGCGGCGAAGCATTTATGGGGTTAACATGACCGGTGTGACAGGTCCATTCAGCTATACATCTGATGAAAATCTTGCCAATCCTGCATTTGAGATCATCAATGTAATTGGAACAGGCTCTAGGAAGATTGGTTATTGGTCTAACTACTCTGGATTATCAGTTCTTCCTCCAGATACTCTTTATTCCAAGCCTGTTAATAATTCCAGGGAAAGTAAAACTTTACTTCCAGTGATTTGGCCTGGAGACACTGATCAAAAGCCCCGTGGTTGGGTTTTTCCCAACAGTGGAAGGCTACTAAAGATTGGAGTACCAAGAAGGGTTAATTACCATGAATTTGTGTCACCGGTAAAAGGCACTGATATGTTTCAGGGATTCTGCATTGATGTGTTTCTTGCTGCAGTGGATTTGTTGCCTTATGCTGTTCCCTATAAGTTTGTCCCCTTTGGCGACGGTCGCATCAATCCTAGCGCCACAGACCTTGTCCGTCGGATCACAACCGGTGAATTTGATGGTGCTGTTGGTGACATTGCCATTACTACAGAAAGAACAAGGATGGTGGATTTTACACAGCCTTATATTGAGTCTGGTCTAGTTGTAGTTGCACCAGTTAGGAAGGCAGAATCCAATGCTTGGGCGTTTTTGTCGCCGTTTACGCCCATGATGTGGGCTGTCACAGCTATGTTTTTCTTGTTTGTGGGAGCTGTTGTTTGGATATTGGAGCATAGAGTTAATGATGACTTTAGGGGACCTCCCAAGAAACAAGTAGTTACTATCTTATGGTTCAGTTTTTCAACTATGTTCTACTCACACAGGGAAAATACAGTTAGCACTCTCGGTCGCTTAGTGCTGATTATATGGTTATTTGTAGTTCTTATAGTTAACTCGAGTTACACAGCGAGTCTAACCTCAATCCTCACAGTGCAACAACTTTATTCACCCATCAAAGGCATTGAAAGTTTGGTAAATAGCAAGGATCCTATTGGTTACACTCAAGGTTCTTTCGCGAAAAATTATTTGATTCAGGAAATTGGCATTGCTGAATCGAGGCTGGTTCCTTTGAACACACCGGAGGAAGCTGCTAATGCTCTTAAAAAGGGTCCCCATGGTGGTGGTGTCTCTGCATACATTGATGAACGTTCCTACATAGAGCTCTTCCTTTCAAGCCGGTGTGATTTCACTGTTATTGGTCAAGAGTTCACTAGAGATGGTTGGGGATTTGCCTTTCCGCGAGACTCGCCTTTAGCAGTAGACCTGTCAACAGCAATTCTGGAAATGGCAGAGAATGGAGACCTACAAAGGATCCATGACAAGTGGCTTCTGCGCAGCGCCTGCTTGTCGCAGGGGACGAAACTGGAAGTGGAAAGACTAAACCTTCAAAGCTTCTGGGGCCTCTATCTGCTATGTGGCTTTGCCTGCTTCATTGCTCTCTTGATATATCTCATACAAGTGACTAGGCAGTACTTCAAGCATGGCTCTGATGAACTTGACCCTTCAGAGCAGGGCTCATCTTCAGGATCTGCGCGCCTTCGGAGCTTCCTTTCATTTGTGGATGAAAAGGAGGAGACAGTTAAGAGCCGCTCCAAGAGAAGGCAAATGGAGAAGATCTCATACAGAAGCAGCATTGGATCATCTATGAGCTCAAACAAAGACTATGCTCAATCTTCTCCATACAAAAATTTTTGTGCTAATGATGCTCAATCTTCTCCACACACAACTGATTGTGCTAATGAAGCATGA 2958 0.4243 MEQQLLSYEETMYKLDQTEYIVGRLDRVATGLNMVKVWFLVLIILSNGFYSNGADMQNFTVPEVVNIGALFSFNGSFGRSVKFAIKAAVDDVNSDPSILGKTKLNLILQEDTKYRGFLSISEVLQVATRHTVAIIGPQSSVTAHVIAHIANELQVPLLSFSALDPTLHSLQFPFFIRTGHSDLYVMTAIADFVDHFGWKDVIAFYVDDDNGRNGIGALGDKLADRRCRISFKAAVSPDATDEEITDVLVQVALAESRVIVLHLNTVWKLKVFNLAKNLGMMETGYVWIGTTFLSAVLDMESPLSSDKMDDIQGVITFRVYTPDSELKRRFVSKWKNLTQADSANGGPLGFTPLILYAYDTVYALAHALDSFFKQGNRITFSNDSKLSVLQGDNLHLDALNIFNEGPSLRRSIYGVNMTGVTGPFSYTSDENLANPAFEIINVIGTGSRKIGYWSNYSGLSVLPPDTLYSKPVNNSRESKTLLPVIWPGDTDQKPRGWVFPNSGRLLKIGVPRRVNYHEFVSPVKGTDMFQGFCIDVFLAAVDLLPYAVPYKFVPFGDGRINPSATDLVRRITTGEFDGAVGDIAITTERTRMVDFTQPYIESGLVVVAPVRKAESNAWAFLSPFTPMMWAVTAMFFLFVGAVVWILEHRVNDDFRGPPKKQVVTILWFSFSTMFYSHRENTVSTLGRLVLIIWLFVVLIVNSSYTASLTSILTVQQLYSPIKGIESLVNSKDPIGYTQGSFAKNYLIQEIGIAESRLVPLNTPEEAANALKKGPHGGGVSAYIDERSYIELFLSSRCDFTVIGQEFTRDGWGFAFPRDSPLAVDLSTAILEMAENGDLQRIHDKWLLRSACLSQGTKLEVERLNLQSFWGLYLLCGFACFIALLIYLIQVTRQYFKHGSDELDPSEQGSSSGSARLRSFLSFVDEKEETVKSRSKRRQMEKISYRSSIGSSMSSNKDYAQSSPYKNFCANDAQSSPHTTDCANEA* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0299 985 Pfam Bacterial extracellular solute-binding proteins, family 3 526 846 IPR001638 -
Ahy5g0299 985 Gene3D - 181 459 - -
Ahy5g0299 985 Gene3D - 789 853 - -
Ahy5g0299 985 Pfam Receptor family ligand binding region 84 444 IPR001828 -
Ahy5g0299 985 MobiDBLite consensus disorder prediction 943 960 - -
Ahy5g0299 985 SMART GluR_14 507 848 IPR001320 GO:0015276|GO:0016020
Ahy5g0299 985 Gene3D - 506 616 - -
Ahy5g0299 985 SUPERFAMILY Periplasmic binding protein-like I 60 498 IPR028082 -
Ahy5g0299 985 PANTHER GLUTAMATE RECEPTOR 40 964 - -
Ahy5g0299 985 MobiDBLite consensus disorder prediction 930 960 - -
Ahy5g0299 985 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 964 - -
Ahy5g0299 985 PIRSF IGluLR_plant 32 982 IPR017103 -
Ahy5g0299 985 Gene3D - 617 745 - -
Ahy5g0299 985 CDD PBP1_GABAb_receptor_plant 66 461 IPR044440 -
Ahy5g0299 985 Gene3D - 83 434 - -
Ahy5g0299 985 SUPERFAMILY Periplasmic binding protein-like II 480 848 - -
Ahy5g0299 985 Pfam Ligand-gated ion channel 847 879 IPR001320 GO:0015276|GO:0016020
Ahy5g0299 985 CDD GluR_Plant 506 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0299 Ahy-Chr5 3518463 3528410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0299 38 947 Ion Channels AT3G51480 58.068 0.0 1104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0299 K05387 - gmx:100785258 1431.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0299 5 3518463 3528410 Ahy1g0846 1 12370474 12375594 PCT
Ahy1g0846 1 12370474 12375594 Ahy5g0299 5 3518463 3528410 PCT