Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0297 ATGAAAATTTGTCTCTTCATCTTCCATTTCTTCGTGTTGTCGATTCTCGCAGCTCAAATATCCTTCTCAGATTCACACGCCTCTGACCTCTCTCTTCTCCACCACCATACCAACCGTCAACCTGCTACGGGCCTCATTGCAGCCCTAGATGGCACTCTCTATCTGCTCGACACTGATTCCGGCAGGGTAATTTGGTCATTCTCCACCGGTTCCCCCATCTACCATTCCTACCTGGCACCTCTCAATTCCGCCAATGAATCTGGACTCATCGAATGCGGTGATGATTGGGAACTCATCCTTCATCACAACCACTTTGGTAAAACGAGGCTCTCGGAATCTATTGCTGATTATGTTGCGGATACGCCTGTTATGTCAGAAGATGGGGCAGTTGTTCTTGGATCCAAAAGAACAACTGTCTTTGAAGTTGATGCTAAAACCGGAAGGCTTGTAAGAAGTTATACCACTGCAGCCTTTGATGATTCGTCCGCCGCCGGCTGGAGTGATGACAGGAAGAATGTGGCTACTGACATTGGTACAAGCAGTAGTGAGCTTGCTGATCCTGCACAGCTTAATCCGCCGGAGTTTTTACTCAAGATATTTAGGACTGATTATCTTTTGCAATCTGTTGGTCCTGGATCTGGAATGGTTTTGTGGACCATGAAAGTAGCTGAATTTAAGGCTGTATTACATTGCCAACATGATGAGTATCCTTCTGACCGGGTGTCATTCGAGGCAGGAGGTCAATATGCTTTCGACAGTGGCTTACGTTTTGCTATGCCGTATGCATGTCATGACAGAAAACTAAAAGATGTCTATCGCCAAAGGAAGAATTTTCTGCTAGAACATGGCAACTCTGAAAGATTATCCGAGGGTTATCAAGAGTTTGATATGCTCCCAACCCCTTCTTCAGAACTGATGCTTCCATTGCAACCTAACAAAAATAGGGTTCCCCATGGTCCTAATAGTAAAATGATGCTTCCTGGGGCCGTGCTAAATCATTTGCCTGCTTTGCCACCAAAAATCAACTATGATAACAATGATCATGCAGTAATGCTCCACCGGTTTCCTATGGATATGGCTGGACCTGGTAAAATTCATGTGAGCAAGGGGATTGAATGGTCAACAACATCAGCTCTTATATTGTTTATAGGATTTATCCTCTGCATTTTGATCTTTTGCTTCTGCCTTAAGAAAAAGAGAGTGCAGAAGGACCAAAACATTGAGGCAATTTTAAAAAGTCCTTCTTCTAAGAAAAAGAGAGCACGTAAGTCTGGAAGGAATGCCATCGTTGTTGACAAACAGGATAGGAATTCATTGCCAGCTGAGGAGGATATACTGACAAATAATGTTGATGGACGGAAGATTGGTAAACTAATTGTACTAAACAAAGAAATTGCTAAGGGTAGCAATGGTACCATTGTTCTGGAGGGGATATATGAAGGTCGGGAAGTTGCTGTCAAACGTCTTGTTCAAGCTCATCATGATGTAGCCAGCAAAGAAATCCAAAACCTTATTGCATCTGATTGCCATCCAAACATTGTTCGATGGTATGGGGTCGAATATGATAATGATTTTGTTTATCTTGCTTTGGAGCGTTGTATATGCAACTTGGATGATTTGATTCAAAATTACTCTGATATATCAGAAAACCCAGTGCATAGCAAGGATCAAGGTTCTAAGATTGTTATAAAGGCTCAGGTGGAGACAGGGAAGGATGACGTGCAATATCTTTGGAAAGCAAGTGGCCATCCATCATCGCTATTACTTAAACTAATGAGGGATGTAATTTCTGGGCTTGCTCATTTGCATGAACTAGGAATAATACACCGGGATTTGAAACCCCAAAATGTTTTGATAACCAAAGAAAGATCACTATGTGCAAAGCTTTCTGATATGGGAATTAGCAAACGCCTTCTTGAAGATATGTCTACGTTGGGTCATAGTGTTACTGGATGTGGGAGTTCAGGGTGGCAGGCACCAGAGCAGCTTGTTCAAGGACGCCAATCACGAGCTTTAGATTTGTTTAGTTTGGGATGTGTCCTATTTTTCTGTATGACTGGGGGAAGACATCCATTTGGAGAGCGCCTTGAGCGCGATGTTAATATTCTAAAAAATCGAAAGGATCTCTTTTTAATAGAGTCCATTCCAGAGGCAGAGGACCTTATCTCTCGTTTATTAAACCCTGATCCGAATTTAAGGCCAAAGGCAATTGAAGTGTTGCACCATCCTCTTTTCTGGAGTTCTGAGATGAGACTTTCATTTCTTCGAGACGCCAGTGATAGGGTGGAACTTGAGGACAGAGAGACTGATTCTGATCTTCTTAGGACATTAGAAAGCATTGCACCAATGGCTTTAGGTGCAAAATGGGACGAAAAGATGGAACCGGCTTTCATTACTAATATTGGTCGTTACAGAAGATATAAATATGACAGTGTTCGAGACTTATTAAGGGTCATGAGAAACAAGCTAAATCATTATAGAGAATTACCTCAAGAAATTCAGGAACTTGTAGGATCTGTTCCAGAAGGATTCAATGACTATTTTGCAAGTCGGTTCCCAAGGCTCTTGATTGAAGTATACAGAGTTATATACGAATATTGCAAGGAAGATCAATGTTTTCAAAGGTTGAGAGAGGCCATGGAACAATCACATCGACATGGTTAA 2664 0.42 MKICLFIFHFFVLSILAAQISFSDSHASDLSLLHHHTNRQPATGLIAALDGTLYLLDTDSGRVIWSFSTGSPIYHSYLAPLNSANESGLIECGDDWELILHHNHFGKTRLSESIADYVADTPVMSEDGAVVLGSKRTTVFEVDAKTGRLVRSYTTAAFDDSSAAGWSDDRKNVATDIGTSSSELADPAQLNPPEFLLKIFRTDYLLQSVGPGSGMVLWTMKVAEFKAVLHCQHDEYPSDRVSFEAGGQYAFDSGLRFAMPYACHDRKLKDVYRQRKNFLLEHGNSERLSEGYQEFDMLPTPSSELMLPLQPNKNRVPHGPNSKMMLPGAVLNHLPALPPKINYDNNDHAVMLHRFPMDMAGPGKIHVSKGIEWSTTSALILFIGFILCILIFCFCLKKKRVQKDQNIEAILKSPSSKKKRARKSGRNAIVVDKQDRNSLPAEEDILTNNVDGRKIGKLIVLNKEIAKGSNGTIVLEGIYEGREVAVKRLVQAHHDVASKEIQNLIASDCHPNIVRWYGVEYDNDFVYLALERCICNLDDLIQNYSDISENPVHSKDQGSKIVIKAQVETGKDDVQYLWKASGHPSSLLLKLMRDVISGLAHLHELGIIHRDLKPQNVLITKERSLCAKLSDMGISKRLLEDMSTLGHSVTGCGSSGWQAPEQLVQGRQSRALDLFSLGCVLFFCMTGGRHPFGERLERDVNILKNRKDLFLIESIPEAEDLISRLLNPDPNLRPKAIEVLHHPLFWSSEMRLSFLRDASDRVELEDRETDSDLLRTLESIAPMALGAKWDEKMEPAFITNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGSVPEGFNDYFASRFPRLLIEVYRVIYEYCKEDQCFQRLREAMEQSHRHG* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0297 887 Pfam Ribonuclease 2-5A 751 875 IPR010513 GO:0004540|GO:0006397
Ahy5g0297 887 SMART ire1_9 37 68 IPR018391 -
Ahy5g0297 887 SMART ire1_9 122 154 IPR018391 -
Ahy5g0297 887 Gene3D Transferase(Phosphotransferase) domain 1 576 747 - -
Ahy5g0297 887 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 48 161 IPR011047 -
Ahy5g0297 887 CDD RNase_Ire1 749 875 - -
Ahy5g0297 887 Gene3D Phosphorylase Kinase; domain 1 446 531 - -
Ahy5g0297 887 Pfam Protein kinase domain 462 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0297 887 SUPERFAMILY Protein kinase-like (PK-like) 461 749 IPR011009 -
Ahy5g0297 887 SMART serkin_6 459 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0297 887 Gene3D - 38 250 IPR015943 GO:0005515
Ahy5g0297 887 Gene3D KEN domain 748 886 IPR038357 -
Ahy5g0297 887 PANTHER IRE1-RELATED 6 875 IPR045133 GO:0004521|GO:0004674|GO:0030968
Ahy5g0297 887 SMART PGNneu 810 864 - -
Ahy5g0297 887 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 6 875 - -
Ahy5g0297 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Ahy5g0297 887 ProSiteProfiles KEN domain profile. 748 879 IPR010513 GO:0004540|GO:0006397
Ahy5g0297 887 Pfam PQQ enzyme repeat 48 74 IPR002372 -
Ahy5g0297 887 ProSiteProfiles Protein kinase domain profile. 459 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0297 Ahy-Chr5 3507610 3511968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0297 485 744 MAP Kinase Kinase Kinase AT3G06030 26.515 6.85e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Ahy5g0297 Pkinase 1.50E-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0297 K08852 - gmx:102661527 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0297 5 3507610 3511968 Ahy1g0847 1 12375452 12381262 PCT
Ahy1g0847 1 12375452 12381262 Ahy5g0297 5 3507610 3511968 PCT