Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0285 ATGGAGTTTGAATCTCTGAGTCTGGCCAATGAGGTCATTGAATTTGATATGATTGGTTTGGGGGATGATGGTGCCATTGATATTGAACATCATGTTGAAGATGATGATGACTATATCAGTGTTGACAATGTTTTTGCTGCTACTGCCGCCACCAATATAGCTGCCACTGTTGGACCTCAAATTCCTATAGGGGACACAAATCTTGAACCTTATCAGGGCATGGAATTTGAATCAGAAGAGGCTGCTAAGGCGTTTTATAATTCCTATGCTCGCCGCATTGGATTTAGTACGAGGGTGAGTATGTCCCGTCGCTCCAGACGTGATGGTGCTATAATTCAGAGGTCTTTTGTGTGTGCCAAGGAAGGTTTTCGTATGGAGAAGGAGAAGAATTCTCTTGATGGCAGAGTCAAACGACCTCGTGCTGAAACTCGTGTTGGTTGCAAGGCCATGTTGGTTGTGAAAATTCAAGTGTCTGGCAGATGGGTTGTTTCTTCATTTGTCAAGGAGCACAACCATGAATTGGTTCCACCTGATAAGGGTGCTGGAATAGGGCCTAGTGGAATTATGTCTGCACTTATCAAAGAATATGGTGGAATTAGCAACATTGGGTTCACTGAGCGTGACTGTAGGAACTACATGAGGAGCAGCCGGCAAAGGACCCTTGGTGGTGACACTCAAATCCTCTTGGATTACTTGAAGAGTAAACAAGCTAAGAATCCTTTGTTTTTCTATGCCGTACAAGGTGATGAGGATCGCTACATGAGTAATATCTTCTGGGCTGATCCTAAGGCCAGGACTAACTACACTTATTTTGGTGACACTGTCACATTTGACACAACATATAGGTCAAACCGCTATAGATTGCCTTTTGCACCTTTCACTGGAGTAAATCATCACGGACAGCCTGTATTATTTGGTTGTGCTCTCTTGATAAATGAATCCGAAGCATCGTTTGTCTGGCTCTTCAAAATGTGGCTTGAAGCGATGTCAGGGCAATCTCCAGTCTCAATCACTACTGATCATGATCGGGTGATTCGCGTAGCCATTAACCGTGTCTTTCCTAATACCCGTCATCGGTTTTGCAAGTGGCACATTTTTAAAGAGTGCCAAGAGAAGTTGTCTCATGTGCTTTCTGAACATGTTAATTTTGAAGCTGACCTTCATAAATGTGTTAATCTGCCAGAGTCCATTGATGAGTTTGAGTCTTGTTGGTCCTCCCTAATAGATAGTTATAATCTCAGAGAACATGAATGGCTCCAAGCAATTTATGGTGATAGGCGGCAGTGGGTTCCCGTGTACTTGAGAGACACATTTTTTGCAGAAATGTCGATAACACAGCGAAGTGATAGCATAAACTCTTACTTTGATGGGTATATTAATGCATCAACAACACTTCAGCATTTTGTTAAGCAGTATGAGAAGGCCCTAGAAAGTCGTCTTGAGAAAGAAGTTAAAGCTGATTATGACACAATAAACACCACTCCAGTTTTGAACACACCATCACCTATGGAGAAACAAGCAGCTGGGATTTACACAAAGAGATTGTTTATCAAATTTCAAGAAGAGTTGGTTGAGACATTAACTTATTTGGCAAACAAAGTAGGTGAAGAAGAAATAACTTCTGTGTATAGAGTAGCCAAATATGGGGATATTCATAGGGCTTACTTTGTCAGATTTAACTCTTTTGAGATGAAGGTTACTTGTAGTTGCCAGATGTTTGAGTTTTTGGGTCTGGTTTGTAGACATATACTGACTGTTTTTAGGGTGACAAATATTCTTACTTTACCTTCTCATTATATTCTAAAAAGATGGACCAGGAATGCTAAAAGTGGAGTCATCTTGGATGAACACACCCCTGATTTGCTAAATGGTGCACGAGAATCTCTAACTATACGATATAATAATCTTCGTCATGAGGCCCTTAAGTATGTTGATGACGGAATAAGGTCTCCAAGAGTTTACGATGTTGCTATGAGTGCGCTACAGGAGGCTGCAAATAAAGTGGCACGAGCGACTAAGAATGATGGAAGACTGGTCATTTCAAATGGAACTTATAAAGAAGATTTACGGTGGAACAATGAAGCTACTACAAGTTACAGGGATCCTCAAACCAGTTTGCAACAATCTTCATCCAAGGATGACCACGACAGAACAATTGAGAAGTTGACAAGACAACTTGACCGAGCTCAAAGGAAGTGTGAAGTTTATAGGTCAAACTTGCTGTCAATTCTAAAAGACATGGAAGAGCAGAAGCTAGAATTATCAGTAAAAGTCCAAAATATCAAGTTAGGGATGAAAGATTGA 2304 0.4093 MEFESLSLANEVIEFDMIGLGDDGAIDIEHHVEDDDDYISVDNVFAATAATNIAATVGPQIPIGDTNLEPYQGMEFESEEAAKAFYNSYARRIGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRMEKEKNSLDGRVKRPRAETRVGCKAMLVVKIQVSGRWVVSSFVKEHNHELVPPDKGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLKSKQAKNPLFFYAVQGDEDRYMSNIFWADPKARTNYTYFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCALLINESEASFVWLFKMWLEAMSGQSPVSITTDHDRVIRVAINRVFPNTRHRFCKWHIFKECQEKLSHVLSEHVNFEADLHKCVNLPESIDEFESCWSSLIDSYNLREHEWLQAIYGDRRQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLQHFVKQYEKALESRLEKEVKADYDTINTTPVLNTPSPMEKQAAGIYTKRLFIKFQEELVETLTYLANKVGEEEITSVYRVAKYGDIHRAYFVRFNSFEMKVTCSCQMFEFLGLVCRHILTVFRVTNILTLPSHYILKRWTRNAKSGVILDEHTPDLLNGARESLTIRYNNLRHEALKYVDDGIRSPRVYDVAMSALQEAANKVARATKNDGRLVISNGTYKEDLRWNNEATTSYRDPQTSLQQSSSKDDHDRTIEKLTRQLDRAQRKCEVYRSNLLSILKDMEEQKLELSVKVQNIKLGMKD* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0285 767 Pfam FAR1 DNA-binding domain 85 176 IPR004330 -
Ahy5g0285 767 Coils Coil 712 739 - -
Ahy5g0285 767 Pfam SWIM zinc finger 563 589 IPR007527 GO:0008270
Ahy5g0285 767 MobiDBLite consensus disorder prediction 693 709 - -
Ahy5g0285 767 ProSiteProfiles Zinc finger SWIM-type profile. 555 591 IPR007527 GO:0008270
Ahy5g0285 767 SMART 26again6 566 593 IPR006564 GO:0008270
Ahy5g0285 767 MobiDBLite consensus disorder prediction 693 718 - -
Ahy5g0285 767 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 179 IPR031052 GO:0006355
Ahy5g0285 767 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 180 741 IPR031052 GO:0006355
Ahy5g0285 767 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 43 179 - -
Ahy5g0285 767 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 180 741 - -
Ahy5g0285 767 Pfam MULE transposase domain 275 367 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0285 Ahy-Chr5 3281982 3285873 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g0285 MULE 1.30E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0285 - - gmx:100782414 1279.62