Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0278 ATGCCTAATGGAAGCTTAGATCATCACCTTTTCTTCAAGGAAGGGACCAACAAAACCCCATTAAGTTGGCATCTAAGATACAAGATCATATCAGGGTTGGTTGCTGCTTTGAACTACCTACACAACGAATGCGATAAGAAAGTGATCCACAGAGATCTCAAAGCAAGTAACATCATGCTAGACTCTGACTTTAATGCACGCTTAGGCGATTTTGGTTTGGCTCGTGCAATTGAGAACAAGAAGACATCTTATGCAAATTTGCATGGTGTTCCTGGAACTATGGGCTACATTGCACCAGAGTGCTTATACATCGGAAAGGCCACGCGTGAATCCGACGTGTATGGATTCGGCGCAGTCTTGCTGGAGGTGGTGTGTGGACAGAGGCCATGGACAAAGAATTTGGACTATCAGTTTCTTGTGGATTGGGTTTGGCACTTGCACCGCCAGGGAAGGATACTAGAGGCAGTAGATCCAAGGCTAGAGAATGAGTTTGAGGCTGAAGAAGCAGAGAGGGTATTGAAATTGGGGTTAGCATGCTCTCACCCCATTGCAAGTGAGAGGCCTAAGATGCAGACAATTGTTCAGATCATATCAGGGTCAGTTCCTGTGCCTTATGTTCCACCCTTCAAGCCACCTTTTGTGTGGCCTGCCGCGGATCAAAGCGGCGCTTCCTCGGGTGATCCTTCTTCAAGTGAGCCTACAGCTGCAACTTTAGAGTACTCTCCCATTAACACAACCTTCTTTGCTCGTTAA 753 0.4675 MPNGSLDHHLFFKEGTNKTPLSWHLRYKIISGLVAALNYLHNECDKKVIHRDLKASNIMLDSDFNARLGDFGLARAIENKKTSYANLHGVPGTMGYIAPECLYIGKATRESDVYGFGAVLLEVVCGQRPWTKNLDYQFLVDWVWHLHRQGRILEAVDPRLENEFEAEEAERVLKLGLACSHPIASERPKMQTIVQIISGSVPVPYVPPFKPPFVWPAADQSGASSGDPSSSEPTAATLEYSPINTTFFAR* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0278 250 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0278 250 Pfam Protein kinase domain 3 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0278 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Ahy5g0278 250 MobiDBLite consensus disorder prediction 222 236 - -
Ahy5g0278 250 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 1 213 - -
Ahy5g0278 250 Gene3D Transferase(Phosphotransferase) domain 1 1 201 - -
Ahy5g0278 250 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g0278 250 SUPERFAMILY Protein kinase-like (PK-like) 1 218 IPR011009 -
Ahy5g0278 250 PANTHER - 1 213 - -
Ahy5g0278 250 MobiDBLite consensus disorder prediction 217 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0278 Ahy-Chr5 3219911 3221007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0278 1 240 Receptor kinase-like Gene Family AT5G55830 46.502 1.08e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy5g0278 Pkinase 6.40E-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0278 - - aip:107639957 441.425