Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0268 ATGGAAAATGGTGCTTCAGGATCTGTGAGGGGTGGTGAGACATGGAAGGCACAGTTGACCATGTCAATGGTGCCCCTAATCTATGGAGCATACCCTGTCATCACAAAAGTTGCACTCAATGATGGAGTCAACCAACTAGTCTTCTGTGTCTACAGAGTTCTCATTGGCTTTTTCGTCCTTTCTCCTTTTGCTTATTTCCTAGAGAGGCAGGCGCGACCGCCCGTTACTAAGCACCTACTCATGTCATTCTTCTTGCTTGGATTACTTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTCTAAACTTGACCAATCCAACATATGCAGCTGCCACTCAGCCAGCCATTCCAGTCTTAACATTTATGTTTTCTGCAATCATGGGCACAGAGAAAGTGAACTTGCTAAGATATGAAGGTGTGGCAAAGGTTGGAGGAACTATTATCTGTGTCTCTGGAGCCATATCAATGGTGTTGTATCCCGGTCCAGTTGTTATAGGAAATCCTGAAACAGGAATGGAGCATGTATCACAGAATCCATCTGGGTTGAAGGATGTAGGATTCGACCAATTCCAACTTGGGGTTATCTGCATAATAGGGAATTGCATGTGCATGGCAGGTTATCTATCAATTCAGGCAAAATTGTTGAAAAAGTACCCCACAAACCTGTCCCTCACAGCATATTCCTACTTCTTTGGAACTGTATTAATGGTGATAGTATCGATTTTCATGACAGACGGGATAACTGACTGGACTTTGACACAGTCAGAAATACTTGCTGTTCTTTATGCTGGAATTATTGCATCTGCTCTTGGTTATGGACTCATAACATGGTCCAACAAGATTTTGGGGCCAACTATGGTTTCCTTATATAACTCCCTTCAACCTGCATTCGCTACCCTGCTGTCCCTAATTTTCCTTGGAAGTCCTGTTTACTTGGGAAGCATCCTGGGAGGAACTTTTATCATTGTTGGCCTATATATTGTTACTTGGGGATCTTACAAAGAAAAGCAGGCAGATGCTGCTGAAAATCTTCCTTGTGAATCTTGTGTTTCTGAGCCACTTATTCATGAAAAGACTGTGTGTTAA 1089 0.4261 MENGASGSVRGGETWKAQLTMSMVPLIYGAYPVITKVALNDGVNQLVFCVYRVLIGFFVLSPFAYFLERQARPPVTKHLLMSFFLLGLLGIFGNQLLFLIGLNLTNPTYAAATQPAIPVLTFMFSAIMGTEKVNLLRYEGVAKVGGTIICVSGAISMVLYPGPVVIGNPETGMEHVSQNPSGLKDVGFDQFQLGVICIIGNCMCMAGYLSIQAKLLKKYPTNLSLTAYSYFFGTVLMVIVSIFMTDGITDWTLTQSEILAVLYAGIIASALGYGLITWSNKILGPTMVSLYNSLQPAFATLLSLIFLGSPVYLGSILGGTFIIVGLYIVTWGSYKEKQADAAENLPCESCVSEPLIHEKTVC* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0268 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 335 - -
Ahy5g0268 362 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020|GO:0016021
Ahy5g0268 362 Pfam EamA-like transporter family 18 143 IPR000620 GO:0016020|GO:0016021
Ahy5g0268 362 PANTHER WAT1-RELATED PROTEIN 17 360 IPR030184 GO:0016021|GO:0022857
Ahy5g0268 362 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 17 360 - -
Ahy5g0268 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0268 Ahy-Chr5 3104931 3108009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0268 100 359 Nodulin-like Gene Family AT5G45370 54.909 7.38e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0268 - - aip:107642467 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g0268 5 3104931 3108009 Ahy1g0878 1 12886172 12888809 PCT
Ahy1g0878 1 12886172 12888809 Ahy5g0268 5 3104931 3108009 PCT