Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0223 ATGTTCGCTGGCGAGGACGCCCGAGCGGCTCGCCTGGCCATGGTGGCGCCGCCGCAGCCGCAGATGTTGAACCCGGCGACATCGTCGGTGATTTCCGGCGAGATATCGCCGACGACGGCAGGGAGAGAGGAGAGGGTTCCGGCACAGCCGCAGTGGAGCCAGCAGGAGACGAGAGAGTTCATAGCGATACGCGCGGAGCTTGAGAGGGACTTCACTGCATCGAAGCGGAACAAGACGCTTTGGGAGGTTGTGAGCTCCAAGATGAGGGAGAGAGGCTTCAGGAGGAGCCCCGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAGCATAGTAGGCAATGTCCATTTTTCGAAGAATTGCATGCAGTATTTACTGAAAGAGCACGAAATATGCAACGACTGCTTCTTGAATCTGAGGCTCGTTCAGCTCAAACAAAGAAAGGGGTGAAAAGGTCAAGTGGAGAACGGTCCTCGGAAGAGTACTCTGAAGATGACGAGGAGGTAGAAGATGACAGTGAAGAGGAGAAGCCTTCTAGAAGCAATGCTCGTAAAAGGAAAGTTGACAAAACTGATAAGTCTTCAAAGGCAAACAATCCATCAAATACTTTCAGTAATACTGCTAGTAGTATTCAGGAAATGCTCAATGAATTTTTCCAGCAGCAGCTAAGGATGGAGATGCAATGGAGGGAAATGATGGATAGGCGTGCCCAAGAAAGACAGCTTTTTGAGCAGGAATGGAGGCACACAATGGAGAAACTTGAAAGGGAGAGATTAATGATTGAACAGACATGGAGGGAGCGGGAAGAACAGAGGAGAATGAGGGAAGAGAGCCGGGCAGAGAGGAGGGATGCTTTGTTGACAACTCTTTTGAACAAACTCATACATGAATCTAACTAA 930 0.4946 MFAGEDARAARLAMVAPPQPQMLNPATSSVISGEISPTTAGREERVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHSRQCPFFEELHAVFTERARNMQRLLLESEARSAQTKKGVKRSSGERSSEEYSEDDEEVEDDSEEEKPSRSNARKRKVDKTDKSSKANNPSNTFSNTASSIQEMLNEFFQQQLRMEMQWREMMDRRAQERQLFEQEWRHTMEKLERERLMIEQTWREREEQRRMREESRAERRDALLTTLLNKLIHESN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0223 309 SMART sant 48 110 IPR001005 -
Ahy5g0223 309 MobiDBLite consensus disorder prediction 19 54 - -
Ahy5g0223 309 ProSiteProfiles Myb-like domain profile. 52 108 IPR001005 -
Ahy5g0223 309 MobiDBLite consensus disorder prediction 154 169 - -
Ahy5g0223 309 MobiDBLite consensus disorder prediction 21 36 - -
Ahy5g0223 309 MobiDBLite consensus disorder prediction 148 216 - -
Ahy5g0223 309 Gene3D - 52 113 - -
Ahy5g0223 309 PANTHER - 41 307 - -
Ahy5g0223 309 CDD GT1 50 115 - -
Ahy5g0223 309 Pfam Myb/SANT-like DNA-binding domain 50 133 IPR044822 -
Ahy5g0223 309 MobiDBLite consensus disorder prediction 170 184 - -
Ahy5g0223 309 PANTHER - 41 307 - -
Ahy5g0223 309 MobiDBLite consensus disorder prediction 185 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0223 Ahy-Chr5 2539088 2541542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0223 36 309 Trihelix Transcription Factor Family AT2G38250 43.310 7.82e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy5g0223 Myb_DNA-bind_4 5.60E-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0223 - - adu:107486987 433.721