Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0213 ATGGACTACGATTCAGATAACCCATCGCAAGATGGGAGGGATGAAGATGATGAAGAAGAATATGAGGAGTCTGGCAAGGATAGTGGTTTTTTAGCCCTCATGTTTGGAAATTTTGATAATTCGGGTGGTCTTGATGCTGATTACTTTGACGAGGATGCAAAGGAGCATATTCATGCATTGGCCGGAAAGTTGGATTCATCACTGACAGATATAGATTTGTCAGGAAAATCACCGCAAACACCACCTGATGTTGTTGAACAAGACTCTATCGAAAAGGCTGAAGATGCAGTTGATTATGAAGATATTGATGAGGAGTACGATGGCCCAGAGACTGAAGCTGCAAATGAAGAGGACTATTTACTCCCAAAAAAGGAATTTTTCGCTGCTGAAGCCTCCCTGGAAGCTCTAGGGTCTAGAACTTCTGTCTTTGATGATGAAAATTATGATGAAGAATCTGACAAGGAACAAGATGGAGTTGATGATTCTAAAGCTGTCTCATTGGCTGGGGAGCAGGAAAAGAGTGTTGTAGATGCATCTAAAGAAGACAAAGACAGTGCGCTTGAACGTGATGTACAAGTTGGGTTGCAGCAGACTGAAGAATTGGCCTTCAAGGTAAAGACACTTGAGGAAGGGCCTGAAGTTCTGAAAAGGTCTACGCCGTTGCCAGTTTTGTATGTGGAAGATGGGATGGAAATTTTACGCTTCTCTGAAATCTTTGGTATTCATGAACCTCTGAGGAAAGGAGAAAGGAGAGAGCATCGGCATTCTGTTACACACGATAGATACAAATCATTGGATTTATCTGATGATATTGTAGAAGAGGATGAAGAGGCATTCCTCAAGGGATTCTCTAGTCTTTCACTGACCAAACAGGCTTGTGTAGTCCATAATGATGCATCAGAAAGTAATGATGTTGATTTGGAATTTCCAAAATTTGGATTTCTTCATGGGGATGCCTCAACACCTGCGAAAGATGATCGACAACAAAAGGACTCTTGTCTTAGTGCTGAACCAATGAAAGGCGATTTCACGAATGAGCTTCCATGGAAAGATACTTATGTCTTGTCAGCCAACTTTTATCCTCTTGATCAGCAAGATTGGGAAGATGAAATCATTTGGGGCAATTCTCCTGTTGTAAGTGACACTAATTTTGAGAGCTGTGAAATTTCGGGACCAGAGTTGGGAGCCTCTGGTGGTAGTGAAATAGAAATTGAAAGTGGGATACAGAATATACAGTTGGAGCCCCAGAAAATAATGGAGGAGAAAAAAAGTAATGTTTCCATGTGCAGCTCTCCTTTATCATTGGAACCAATTGGCTCAAGGGACTCTTCTGATGCTAAAACTGATTTATTATCTAAAAATCTATTTCATCCCCAGCTTTTGAGGTTAGAATCCAGATCAGAGATGGATGACACTGGTTATGCAGATGGAAGAGCGGAGTACACGTCTGAAAAGCATAATGAGCTTGGCCATGTAAAGCGTTTTACCAAGGTGATGTCTCAAAATAGAGACCTGGCTGAGGGGTCTTGGTTAGACAATATTATATGGGAGTTCAATAAACCTTCTGTTAAACCAAAGCTTATCTTTGATCTTGAAGATGACCAAATGCACTTCGAAGTTTTGGATAACAAGAATAGTAGCCATCTTCACCTTCATGCTGGGGCTATGATTTTGACTCGTTCCTTAAAATCAAGCAGTGGGGATTCTGAGCTACCAGTACAGGGAGGTCAATATGGATGGCGATATGTTGCTAATGATAAACATTATTCAAACAGGAAAACTTCTCAGCAACTGAAGTCAAATTCTAAGAAACGCTCAGCGCATGGTGTCAAAATTTTCCACTCCCAACCTGCACTGAAGCTGCAGACAATGAAGTTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGTCCTAAAGCATTATGGTATCCCCATGATAGTGAGGTTGTTGTCAGAGAACAGAGAAAACTGTCAACACAGGGACCCATGAAAATTATTATGAAGAGCTTGGGTGGCAAGGGGACAAAACTACATGTTGATGCTGAAGAAACTCTAGCTTCTGTTAAAGCAAAAGCTGCTAAAAAGCTAGATTTCAAGGGATCAGAAAACGTGAAAACATTTTATTTGGGGAGGGAGCTTGAGGATCAGAAATCACTTGCTGCACAGAACGTTCAATCAAATTCATTGTTACACCTTGTACGGACAAAGATTCACTTGTGGTCAAGGGCACAAAGGGTTCCTGGTGAGAATAAGTCACTGCGTCCTCCAGGGGCATTCAAGAAAAAGTCTGATCTGTCCGTGAAAGATGGCCATGTTTTTCTGATGGAGTATTGTGAGGAAAGGCCTTTACTTTTGGGCAATGCTGGAATGGGTGCAAGGCTTTGTACGTACTATCAAAAGTGTTCTCCAGATGATCAATCTGGCTCTTTATTACGCAACACTGATAATAGCTTGGGGCACATTATATCTCTCGATCCAGCTGATAAATCTCCGTTCCTTGGGGACTTGAAACCTGGCTGCAGTCAGTCCTCACTGGAGACAAATATGTATAGAGCACCTATATTTCCTCATAAAGTTCCATTAACTGACTACCTGCTGGTACGCTCACCAAAGGGAAAGCTATCACTAAGGCGCATTGATAAAATTAATGTTGTTGGACAGCAGGAGCCTCTGATGGAGGTGTTATCACCTGGAAGTAAGAATCTTCAGACTTACATGATGAACAGGCTATTAGTACACATGTGCCGTGAATTCCAAGCGGCAGAGAAGCGGCTCTTGCTCCCATGTGTCCGTATTGATGAGCTTCTGTCACAATTTCCTTACCTATCAGAAGCCTCTTTCCGTAAAAGGATTAAGGAATATGCCACTTTACAGAGGGGAACAAATGGACAGTCAATTTTGGTTAAAAAGCGAAATTTTCGCATGTGGTCTGAGGAAGAATTAAGAAAAATGGTGACCCCAGAACTTGTTTGTGCTTATGAAAGCATGCAAGCTGGCCTCTACCGTCTGAAACATTTAGGCATAACCGAAACACACCCTACTAATATTTCGTCTGCAATGAGTCGGCTTCCTGATGAAGCGATTGCACTGGCTGCTGCATCACATATTGAAAGGGAACTGCAGATTACTCCTTGGAACTTGAGTAGCAACTTTGTTGCCTGTACAAGCCAGGGTAAGGAAAATATTGAACGAATGGAAATCACTGGTGTCGGGGATCCATCTGGCCGTGGCTTGGGATTTAGCTATGCTCGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAGTGGTGAAGAAGAAAGCTGCTGCTGGCCGGGGTGGTTCCACTGTTACTGGTACAGATGCTGATCTCCGTAGATTAAGCATGGAGGCTGCACGGGAGGTGCTGCTTAAATTCAATGTTGCTGAGGAAGTCATTGCAAAACAAACAAGATGGCATCGCATTGCTATGATACGCAAACTTTCAAGTGAGCAGGCTGCATCTGGGGTTAAGGTCGATCCAACTACTATCAGCAAATATGCTCGTGGCCAGCGAATGTCTTTTCTTCAGTTACAGCAACAGACCAGAGAGAAGTGCCAAGAGATCTGGGATCGACAACTTCAGAGTCTTTCAGCTGTAAATGGTGATGAAAATGAGAGTGATTCAGAAGAGAACAGTGATCTAGATTCTTTTGCTGGTGATCTTGAAAATTTACTTGATGCTGAGGAGTTTGAAGAGGGAGAAGAGGGTACCAATGACTTGAAACGTGATAAGGGAGATGGTGTTAAGGGTCTCAAAATGAGAAGACACCCAACCTCAGCCCAAGCTAGGGAGGAAAAAGAAGATGAAGAGGCTGAGGCTGCCGAATTATGCAGGTTGCTTATGGATGATGATGAAGCTGACAGGAAGAAAAAGAAGAAAGCTAGAGTTGTGGAAGAAGCTAGACTGGTACCAAAGCCGCCACCAAAATTCATCATCTATGACAGTACTGAACAAAATAAGCAAGTAACAAATACTTCACAACTAGATGGAACCATTCATTTGAAAGATGATGCAATTACAGATCTCAGGGAGGAGGAAACTTTTCCTGCTAAAAAAGCGAAATCAGTGAAGGTCACAAAAGCAAAGAAGAATGAAATTGCACCTATTAGTCTACCTAATAAAAAACTTAAACTAAATATAGGAGAAGGAGCAATCAAGGTATTTAAGGAGAAAAAACCATCCAGGGAAACTTTTGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGAGGACCAACAAGAACTGTCCAAAATATGGTGAAGATCTAGAAGCACAGATTGAATCTACAGACATTGAAAAACCATCTGGAAAGTCTATCATTTTGGATCCCTCTAATCAGTCCCAGCAGAAAAGCCTCACGAAAAAGTTGGTGCCTAAAACTGCACCCAAAACCCCTTCAGTTGACAATTCCACAAAATTGAAGTTCATATGCATCTCCACTGAGAAGTCTTCTGATAAACCTGCTTTAGAAAACCTGCAGAGTTCTGAGAAGCCAGTCACATCTGATTCTGAAACTGCTAGGTCTGCTAAGGTTAATAGAATAATTTTTCCTAAAAAAGTGAAGCCAGATGATACACAGGCTGAATCTGTAAGACGTCCTATCGTTATTCGGCCTCCTACTGATTCTGCTAGAGGTCAGGTTGATTCTCCCAAGGTCCCAATTAAATTTCGGCCACCTACAGATATAGAGAGGGAGAGACATCATCAAAAGCTTGTTATTAAACCTGCAAAGGAGATTGTTGATGTGGACCTTGACAGTCCTTATGGAAACAAACGACTAGAACACAGAAAAACCAAGAGAATTGTTGAACTGGCCAATTTTGAGAAACAAAGAAAGCCAGAGCCCATGTATCGGCAAGCTAAAGAGGAGAGGAGATGGTGGGAAGAGCAAGAGAAACGAAGAAACGAAGCGAGACTCAAAGAAGAAAGGGCTAGAAGACACCACAAAGAAGAAGTTAGGATGCTCAGAGAGCAAGAGAAGTTAGACGAGATAAAAAGATTCGAAGAAGATATTAGAAGAGAGAGGGAGGAGGAGGAACGGCAAAAGGCGAAGAAGAAAAAGAAGAAGAAAAAGCCCGAATTTACAGACGACTATTTAGATGACCCCAGAGCTAGAAGATATGATAAGAGGATGCTAGACAGAGACAAGAGCACGAAAAAACGTGGCGCAGACTTGATGCCGCCAACAAAACGGCGAAGAGGGGGAGGGGGAGAGGTTGGTTTAGCAAACATATTGGAGAGCATTGTGGATGCCATGAAAGATAAGTATGAGCTGTCATATCTTTTTATGAAACCGGTTTCCAAGAAAGAGGCTCCTGATTACCTGGACATTATAGAGAGGCCTATGGATCTTGCTCGAATCCGGGAGAGGGTTCGGAATATGGAGTACAAGAGCAGAGAGGATTTCAGACACGATGTTTGGCAAATAACTTATAATGCTCATAAGTATAACGATGGGCGAAATCCTGGGATTCCACCCCTTGCAGATATGCTTCTGGAATATTGTGATTATTTATTGAATGAGAATGATGAACACCTCACTGAAGCGGAAGCTGGTATTGAGAATAGAGATTTCTAA 5598 0.4228 MDYDSDNPSQDGRDEDDEEEYEESGKDSGFLALMFGNFDNSGGLDADYFDEDAKEHIHALAGKLDSSLTDIDLSGKSPQTPPDVVEQDSIEKAEDAVDYEDIDEEYDGPETEAANEEDYLLPKKEFFAAEASLEALGSRTSVFDDENYDEESDKEQDGVDDSKAVSLAGEQEKSVVDASKEDKDSALERDVQVGLQQTEELAFKVKTLEEGPEVLKRSTPLPVLYVEDGMEILRFSEIFGIHEPLRKGERREHRHSVTHDRYKSLDLSDDIVEEDEEAFLKGFSSLSLTKQACVVHNDASESNDVDLEFPKFGFLHGDASTPAKDDRQQKDSCLSAEPMKGDFTNELPWKDTYVLSANFYPLDQQDWEDEIIWGNSPVVSDTNFESCEISGPELGASGGSEIEIESGIQNIQLEPQKIMEEKKSNVSMCSSPLSLEPIGSRDSSDAKTDLLSKNLFHPQLLRLESRSEMDDTGYADGRAEYTSEKHNELGHVKRFTKVMSQNRDLAEGSWLDNIIWEFNKPSVKPKLIFDLEDDQMHFEVLDNKNSSHLHLHAGAMILTRSLKSSSGDSELPVQGGQYGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKIFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDSEVVVREQRKLSTQGPMKIIMKSLGGKGTKLHVDAEETLASVKAKAAKKLDFKGSENVKTFYLGRELEDQKSLAAQNVQSNSLLHLVRTKIHLWSRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLGNAGMGARLCTYYQKCSPDDQSGSLLRNTDNSLGHIISLDPADKSPFLGDLKPGCSQSSLETNMYRAPIFPHKVPLTDYLLVRSPKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVHMCREFQAAEKRLLLPCVRIDELLSQFPYLSEASFRKRIKEYATLQRGTNGQSILVKKRNFRMWSEEELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKAAAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVAEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQLQSLSAVNGDENESDSEENSDLDSFAGDLENLLDAEEFEEGEEGTNDLKRDKGDGVKGLKMRRHPTSAQAREEKEDEEAEAAELCRLLMDDDEADRKKKKKARVVEEARLVPKPPPKFIIYDSTEQNKQVTNTSQLDGTIHLKDDAITDLREEETFPAKKAKSVKVTKAKKNEIAPISLPNKKLKLNIGEGAIKVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDLEAQIESTDIEKPSGKSIILDPSNQSQQKSLTKKLVPKTAPKTPSVDNSTKLKFICISTEKSSDKPALENLQSSEKPVTSDSETARSAKVNRIIFPKKVKPDDTQAESVRRPIVIRPPTDSARGQVDSPKVPIKFRPPTDIERERHHQKLVIKPAKEIVDVDLDSPYGNKRLEHRKTKRIVELANFEKQRKPEPMYRQAKEERRWWEEQEKRRNEARLKEERARRHHKEEVRMLREQEKLDEIKRFEEDIRREREEEERQKAKKKKKKKKPEFTDDYLDDPRARRYDKRMLDRDKSTKKRGADLMPPTKRRRGGGGEVGLANILESIVDAMKDKYELSYLFMKPVSKKEAPDYLDIIERPMDLARIRERVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDEHLTEAEAGIENRDF* 1866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0213 1865 Coils Coil 1664 1698 - -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1 28 - -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1618 1658 - -
Ahy5g0213 1865 ProSiteProfiles Bromodomain profile. 1761 1831 IPR001487 GO:0005515
Ahy5g0213 1865 SUPERFAMILY Bromodomain 1731 1855 IPR036427 GO:0005515
Ahy5g0213 1865 Pfam Protein of unknown function (DUF3591) 584 1150 IPR022591 -
Ahy5g0213 1865 Pfam Ubiquitin family 668 736 IPR000626 GO:0005515
Ahy5g0213 1865 ProSitePatterns Bromodomain signature. 1766 1823 IPR018359 -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1446 1462 - -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1440 1472 - -
Ahy5g0213 1865 ProSiteProfiles Ubiquitin domain profile. 664 734 IPR000626 GO:0005515
Ahy5g0213 1865 PANTHER BNAA01G26290D PROTEIN 1388 1862 - -
Ahy5g0213 1865 Pfam Bromodomain 1753 1827 IPR001487 GO:0005515
Ahy5g0213 1865 Gene3D - 1670 1864 IPR036427 GO:0005515
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1697 1735 - -
Ahy5g0213 1865 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 15 1335 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Ahy5g0213 1865 SUPERFAMILY Ubiquitin-like 635 734 IPR029071 -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1680 1744 - -
Ahy5g0213 1865 SMART bromo_6 1741 1851 IPR001487 GO:0005515
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1 24 - -
Ahy5g0213 1865 PRINTS Bromodomain signature 1764 1777 IPR001487 GO:0005515
Ahy5g0213 1865 PRINTS Bromodomain signature 1812 1831 IPR001487 GO:0005515
Ahy5g0213 1865 PRINTS Bromodomain signature 1778 1794 IPR001487 GO:0005515
Ahy5g0213 1865 PRINTS Bromodomain signature 1794 1812 IPR001487 GO:0005515
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 142 185 - -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 69 119 - -
Ahy5g0213 1865 Coils Coil 1266 1286 - -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1493 1513 - -
Ahy5g0213 1865 PANTHER BNAA01G26290D PROTEIN 15 1335 - -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1236 1277 - -
Ahy5g0213 1865 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1388 1862 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Ahy5g0213 1865 SMART ubq_7 664 736 IPR000626 GO:0005515
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1242 1277 - -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 1544 1564 - -
Ahy5g0213 1865 Gene3D - 646 736 - -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 70 84 - -
Ahy5g0213 1865 MobiDBLite consensus disorder prediction 93 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0213 Ahy-Chr5 2428434 2447336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g0213 664 734 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.028 4.29e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0213 K03125 - gmx:100780733 2784.98